Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g4180 ATGGTGCAGGGTCGCAAAGGAGAGCGCGTCAGACTCTATGTGAGGGGCACAATCCTGGGATACAAAAGGTCCAAATCAAACCAGTACCCAAACACTTCTCTGGTCCAAATTGAGGGAGTGAACACTAAGGAGGAGGTAGCATGGTATGCTGGAAAGAGATTGGCCTATATCTACAAGGCCAAGGTGAAGAAGAATGGAACCCACTACCGCTGCATATGGGGCAAGGTTACAAGGCCCCACGGTAACAGTGGTGTTGTTCGCACAAAATTCAAGTCAAACCTTCCTCCTAGATCAATGGGAGCACGGGTAAGAGTTTTCATGTATCCAAGCAACATATGA 339 0.4808 MVQGRKGERVRLYVRGTILGYKRSKSNQYPNTSLVQIEGVNTKEEVAWYAGKRLAYIYKAKVKKNGTHYRCIWGKVTRPHGNSGVVRTKFKSNLPPRSMGARVRVFMYPSNI* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g4180 112 Gene3D translation elongation factor selb, chain A, domain 4 6 112 IPR038661 -
Lja4g4180 112 PANTHER 60S RIBOSOMAL PROTEIN L35A 1 112 IPR001780 GO:0003735|GO:0005840|GO:0006412
Lja4g4180 112 PANTHER 60S RIBOSOMAL PROTEIN L35A-1 1 112 - -
Lja4g4180 112 Pfam Ribosomal protein L35Ae 12 106 IPR001780 GO:0003735|GO:0005840|GO:0006412
Lja4g4180 112 Hamap 50S ribosomal protein L35Ae [rpl35ae]. 14 106 IPR001780 GO:0003735|GO:0005840|GO:0006412
Lja4g4180 112 SUPERFAMILY Translation proteins 12 106 IPR009000 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g4180 1 112 Cytoplasmic Ribosomal Protein Gene Family AT1G07070 88.393 5.02e-73 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g4180 K02917 - jre:108991889 225.328