Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g4174 ATGGCTTCAAGTGTAGACACTGATCAAGATGGTGATAACATAGGTAGCATGTGGGATTTGGATCAGAAGCTTGACCAGCCCATGGATGAAGAAGCAGGAAGGCTCAGAAATATGTACAGAGAAAAAAAATTTTCAGCATTGTTGCTTCTGCGGCTTGCATATCAAAGTCTTGGTGTGGTTTATGGAGATTTGGGAACTTCACCCTTGTACGTTTTCTACAATACATTTCCGAATGGCGTGAAAGATGAGGAGGATTTAATTGGAGCTCTTTCCTTGATTATCTACTCTCTCACTTTGGTTCCGCTTGTCAAATATGTTTTTATTGTTTTAAGAGCAAATGACAATGGCCAAGGTGGAACATTTGCGCTTTATTCCTTGCTCTGCCGACATGCAAAAATTAAAACCATTCCCAACCAGCATCGCACCGATGAAGAGCTTACAACATATAGTCGTTCCACCTTCCATGAAAGGTCATTTGCTGCAAAAACCAAAAGATGGTTAGAGGAACATGAATCTAGGAAGAGCGCCATTCTTATTCTCGTCCTTGTTGGTACCTGCATGGTGATTGGAGATGGGATTCTTACCCCAGCTATATCTGTTTTATCAGCTGTTGGTGGCATCAAGGTAAATCAGCCTCACATGAGTAGCGGTGCAGTTGTGTCGGTTGCTGTTTTAATACTAGTTGGGTTTTTCAGCTTGCAACACTATGGCACAGATAAAGTTAGTTGGCTTTTCGCTCCAATTGTTCTTCTTTGGTTTCTCCTAATCGGAGGTATCGGTTTATATAACATCTGGTACTATGGAGGCAGCGTTCTAAGGGCTTTCTCTCCTGTGTATATATATCGCTATTTTAACAGAAGAGGAAAAGAAGGATGGACTTCCCTTGGTGGCATCATGCTCAGCATAACAGGAACCGAGGCTCTTTTTGCGGACCTAGCTCATTTTCCAGTCTCAGCTGTACAGCTTGCATTTACTTTAGTTGTGTTTCCTTGCCTTCTTTTAGCCTATTCTGGACAAGCTGCTTACCTTACGCAAAACTTGAGTCATTCACAAGATGCGTTTTACCGTTCTATTCCAGAAAAAATATACTGGCCAGTATTTGTTGTTGCAACAGCAGCAGCCATAGTTGCTAGCCAGGCCACAATATCGGCAACTTTTTCAATTATTAAGCAAGCCCTTGCTCATGGATGTTTCCCTAGAGTTAAAGTTGTATACACATCAAAGAAATTCCTTGGCCAGATATATATTCCAGATATCAATTGGGTCCTTATGGTTCTTTGCATTGCTGTTACTGCTGGGTTTGAAGAGCAAAGCCAGATTGGAAATGCATATGGTACCGCAGTTGTGATAGTCATGCTGGTTACGACATTGCTTATGATTTTAATCATGATATTAGTGTGGCGTTGCCATTGGATTCTTGTCCTCATCTTCACTTGCTTATCATTGATTGTGGAATGCACCTACTTCTTCTCTGTACTCTTCAAAGTTAACCAAGGTGGGTGGGTTCCCCTTGTGATTGCTGGAGCATTTCTTGTTATTATGTCTGTTTGGCATTACGGCACGGTGAAACGCTATGAGTTTGAAATGCACAGTAAGGTCTCCATGGCATGGATTCTCGGCCTTGGCCCAAGTTTAGGACTTGTTCGTGTCCCTGGAATCGGACTAGTCTACACAGAGCTCGCGAGCGGAGTACCCCACATTTTCTCTCATTTCATCACCAACCTACCAGCCATCCACTCCGTGGTTGTTTTTGTGTGTGTCAAGTACCTTCCTGTCTACACAGTCCCGGAAGAAGAGCGATTCCTTGTTAAGAGGATCGGACCTAAGAATTACCACATCTTCCGATGCGTGGCGCGGTATGGCTACAGAGACCTGCACAAGAAGGATGAGGGTTTTGAGAAAAAGCTTTTTGATAACCTTTTCATGTTTGTTCGGCTCGAATCTATGATGGAAGGGTGTTCGGATTCCGATCAGTACAGTGTATATGGACAGCAAACAGAGCAATCAAGAGATGTCCTATTGAATAACAATGGAAACACAGCTTCTTTCAACATAGATTCACCAGTTTCCTCAGAAGACTCAATTTTACCAGTCATATCACCACCACATGTGAATATTACTGTCAGGTCCTGTGGTCAAGTTAGCAACCACACCGAGGTTGATGAGCTTGAGTTTTTGAATAGGTGCAGGGATGCAGGGGTGGTTCACATACTAGGAAACACAGTTGTGATGGCAAGGAGGGATTCAAGGTTCTACAAGAAAATAGCTGTTGATTATATATATGCATTTCTTAGGAAGATATGCAGGGAACATAGTGTGATCTTCAATGTTCCTCATGAGAGTCTCTTAAATGTAGGACAAATTTTCTATGTATAG 2376 0.4242 MASSVDTDQDGDNIGSMWDLDQKLDQPMDEEAGRLRNMYREKKFSALLLLRLAYQSLGVVYGDLGTSPLYVFYNTFPNGVKDEEDLIGALSLIIYSLTLVPLVKYVFIVLRANDNGQGGTFALYSLLCRHAKIKTIPNQHRTDEELTTYSRSTFHERSFAAKTKRWLEEHESRKSAILILVLVGTCMVIGDGILTPAISVLSAVGGIKVNQPHMSSGAVVSVAVLILVGFFSLQHYGTDKVSWLFAPIVLLWFLLIGGIGLYNIWYYGGSVLRAFSPVYIYRYFNRRGKEGWTSLGGIMLSITGTEALFADLAHFPVSAVQLAFTLVVFPCLLLAYSGQAAYLTQNLSHSQDAFYRSIPEKIYWPVFVVATAAAIVASQATISATFSIIKQALAHGCFPRVKVVYTSKKFLGQIYIPDINWVLMVLCIAVTAGFEEQSQIGNAYGTAVVIVMLVTTLLMILIMILVWRCHWILVLIFTCLSLIVECTYFFSVLFKVNQGGWVPLVIAGAFLVIMSVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNYHIFRCVARYGYRDLHKKDEGFEKKLFDNLFMFVRLESMMEGCSDSDQYSVYGQQTEQSRDVLLNNNGNTASFNIDSPVSSEDSILPVISPPHVNITVRSCGQVSNHTEVDELEFLNRCRDAGVVHILGNTVVMARRDSRFYKKIAVDYIYAFLRKICREHSVIFNVPHESLLNVGQIFYV* 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g4174 791 TIGRFAM kup: potassium uptake protein 52 790 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lja4g4174 791 Pfam K+ potassium transporter 54 624 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lja4g4174 791 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 2 790 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lja4g4174 791 PANTHER POTASSIUM TRANSPORTER 2 790 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g4174 Lja-Chr4 75250620 75257297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g4174 1 791 Inorganic Solute Cotransporters AT2G35060 78.788 0.0 1237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g4174 K03549 - gmx:100794454 1377.07