Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g4132 ATGGCAGCCTCAACAATGGCGCTCTCCTCCCCATCATTGGCTGGCCAGGCCCTTAACCTGAGCCCATCATCCCAAGAAGTTGGCAGGTTCAGCATGAGGAAGGCAGCCACCACCAAGAAAGTTGTTTCATCCGGAAGCCCATGGTACGGCCCAGACCGCGTCAAATACTTGGGCCCATTCTCCGGTGAGCCCCCGTCCTACTTGACCGGTGAGTTCCCCGGTGACTACGGCTGGGACACTGCTGGGCTTTCTGCTGACCCCGAGACATTCGCCAAGAACCGTGAGCTTGAGGTGATCCACTCTAGGTGGGCCATGTTGGGAGCTTTGGGCTGTGTTTTCCCAGAGCTCTTGGCCCGCAACGGGGTTAAATTCGGTGAGGCTGTGTGGTTCAAGGCTGGGTCACAAATCTTCAGCGAGGGTGGGCTTGACTACTTGGGCAACCCGAGCCTGGTCCACGCTCAGAGCATTCTTGCAATTTGGGCCACTCAGGTTATCTTGATGGGAGCAGTTGAGGGTTACCGTATTGCTGGTGGGCCTCTTGGTGAGGTGACCGACCCACTCTACCCAGGTGGCAGCTTTGACCCATTGGGCCTTGCTGATGACCCAGAGGCTTTTGCTGAGCTTAAAGTGAAGGAACTCAAGAATGGAAGGTTGGCCATGTTCTCAATGTTTGGATTCTTTGTTCAAGCTATTGTGACCGGAAAGGGGCCTTTGGAGAACCTTGCAGACCACCTTTCTGACCCAGTTAACAACAATGCCTGGGCCTATGCCACCAACTTTGTCCCTGGAAAGTGA 795 0.5509 MAASTMALSSPSLAGQALNLSPSSQEVGRFSMRKAATTKKVVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWAYATNFVPGK* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g4132 264 Pfam Chlorophyll A-B binding protein 64 230 IPR022796 -
Lja4g4132 264 Gene3D Chlorophyll a/b binding protein domain 55 257 - -
Lja4g4132 264 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 264 IPR001344 GO:0009765|GO:0016020
Lja4g4132 264 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC 1 264 - -
Lja4g4132 264 SUPERFAMILY Chlorophyll a-b binding protein 47 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g4132 Lja-Chr4 74719208 74721535 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g4132 1 264 Chloroplast and Mitochondria Gene Families AT2G34430 88.433 1.68e-171 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g4132 K08912 - gmx:100805310 505.368