Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g4094 ATGGACGATCTTCTCAAGTCCATCTACACTCCTTCCAAGGACATCAAACCCCCCACCTCCCTTGACGATGTCTGGAGAGACATCGTCGCCGCCGGAACCACCGCCATCGCCGCCGAGGAAATGACCCTTGAGGATTTCTTAACCAAGACCGGCGCTGTCAGGGAGGAAGATGTTAGAGGACTTCTTCCTCCTCCTCCTCCTCCTCCTCCGTCTCACTTCCACCTCCCTCCGCCTCCTCCTTCCGCTTCCGACGCTTCATCTTCTCTTGTAACACCAAATGGGGTTTCAGCGGCTTCAGTGGCTAAGGGGAAGAGAAGGGCTATTGAGGAGCCTGTTGATAAGGCCACTCTTCAGAAGCAGAGGAGAATGATCAAGAATAGAGAGTCTGCAGCTAGGTCCAGGGAACGAAAGCAGGCTTACACTACTGAGCTTGAGGCTATAGTTCAGCAGCTGGAGGAGGAGAATGCGCGATTAATGGAAGAAGAGGCGGAGAGGAACAGGCAGAGGCTCAAGCAGGTATTTGTAAATGGTATCATTCATAGTGCAAGTGAGGGTGATTTATTGGCAAGCCTTGAAAAGTAA 582 0.5206 MDDLLKSIYTPSKDIKPPTSLDDVWRDIVAAGTTAIAAEEMTLEDFLTKTGAVREEDVRGLLPPPPPPPPSHFHLPPPPPSASDASSSLVTPNGVSAASVAKGKRRAIEEPVDKATLQKQRRMIKNRESAARSRERKQAYTTELEAIVQQLEEENARLMEEEAERNRQRLKQVFVNGIIHSASEGDLLASLEK* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g4094 193 Gene3D - 117 173 - -
Lja4g4094 193 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 121 136 IPR004827 GO:0003700|GO:0006355
Lja4g4094 193 Pfam bZIP transcription factor 115 162 IPR004827 GO:0003700|GO:0006355
Lja4g4094 193 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 116 168 IPR004827 GO:0003700|GO:0006355
Lja4g4094 193 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 19 176 IPR043452 GO:0003700|GO:0045893
Lja4g4094 193 Coils Coil 134 173 - -
Lja4g4094 193 SUPERFAMILY Leucine zipper domain 118 168 IPR046347 GO:0003700|GO:0006355
Lja4g4094 193 MobiDBLite consensus disorder prediction 50 140 - -
Lja4g4094 193 PANTHER OS05G0437700 PROTEIN 19 176 - -
Lja4g4094 193 MobiDBLite consensus disorder prediction 60 83 - -
Lja4g4094 193 SMART brlzneu 114 176 IPR004827 GO:0003700|GO:0006355
Lja4g4094 193 MobiDBLite consensus disorder prediction 103 140 - -
Lja4g4094 193 CDD bZIP_plant_BZIP46 118 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g4094 Lja-Chr4 74213802 74215651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g4094 15 174 bZIP Transcription Factor Family AT1G03970 40.936 2.61e-29 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lja4g4094 bZIP_1 1.1e-12 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g4094 4 74213802 74215651 Lja4g4094 4 74213802 74215651 ECH