Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g4089 ATGGTGAACATAATGAACAGGTTATGCAATTCATTGCAAGGGATGAAACCAGTGATACTAATGGTGTTTACGCAGATTGCATATGCGGCGGTGAATATCGTCTACAAGCTCGCCATAAATGATGGAATGAGCATGAGAGTCGCCACTGCCTATCGCCTCACTTTTGCATCAGCTTTCACTGTCCCTCTTGCTCTTTTCTTTGATAGGAAGAAGAGACCAAAGATTACATTGAGGGTGCTTTTTATGGCATTTCTTTGTGGTTTGTTTGGGGGAAGTTTATTTCTAAACCTTTACGCTCTGGGTTTGGCCATGACATCAGCAACGTTTATGTTGGCCGTGTTAAACCTTATTCCCGGTGTTACCTTCATCATGGCCACTTCCTTTGGATTGGAAAAATTGAATTTCGGAGTAATAGAAGGGAAGGCTAAGGTGGCAGGAACAACAATTGGAATTAGTGGGGCAATGTTGATGACCTTTTTCAAAGGGGTGGAAATTAACATTTCATCTTCCAAAATTAACCTTTTGCATCCACATCAAGACCAAAATGGGCATATGGGACCACAACACGTAGACTTCAGTAATAAACTGCTAGGGGTTCCTTGTGCCTTAGCAAGCAGCTGCTCTTTTTCTTTGTGGTTAATCACTCAGGCTAAGATGAACCAAGAATACCCGAGTCATCACTCAAGTTCAGCTTTGATGTCCGTAATGGGGGCGATCCAGTCTATTGTTCTTGCTCTTTGTGTTGATAGGGATTGGAGCCAGTGGAAGCTAGGTTACAATATTAGGCTTTTAACCGTGGCTTATTCGGGGATTGTGACTTCTGGTATTGTGGTTATTGTTATTGCATGGTGCATTAAGATGAGAGGCCCTCTATTTGCATCTGTTTTCAATCCTGTACAGCTTTTAGCTGTGGCGATTGCTGCTTATTTATTGTTGGATGAGAAGTTATATTTAGGAAGTGTGCTCGGAGGAGTGTTGATCGTGTGTGGCTTATACGTTGTCCTTTGGGGTAAGAGCAAAGAAATGAAAAAGAAGATTCAGTTAGTGCGATTACAAAATACCACAGAGCCCCAAGTTATTGAAGTTGCTATTATGTCCACACCTGTAAATCATGATAAATGCATTCACAACTACCAGAGTCAAACTAGTGCTATTGAGAATGTTGCTTATGATCAAAGACTAGTAGTAATAGAATAG 1197 0.4127 MVNIMNRLCNSLQGMKPVILMVFTQIAYAAVNIVYKLAINDGMSMRVATAYRLTFASAFTVPLALFFDRKKRPKITLRVLFMAFLCGLFGGSLFLNLYALGLAMTSATFMLAVLNLIPGVTFIMATSFGLEKLNFGVIEGKAKVAGTTIGISGAMLMTFFKGVEINISSSKINLLHPHQDQNGHMGPQHVDFSNKLLGVPCALASSCSFSLWLITQAKMNQEYPSHHSSSALMSVMGAIQSIVLALCVDRDWSQWKLGYNIRLLTVAYSGIVTSGIVVIVIAWCIKMRGPLFASVFNPVQLLAVAIAAYLLLDEKLYLGSVLGGVLIVCGLYVVLWGKSKEMKKKIQLVRLQNTTEPQVIEVAIMSTPVNHDKCIHNYQSQTSAIENVAYDQRLVVIE* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g4089 398 PANTHER WAT1-RELATED PROTEIN 15 359 IPR030184 GO:0016021|GO:0022857
Lja4g4089 398 Pfam EamA-like transporter family 197 335 IPR000620 GO:0016020|GO:0016021
Lja4g4089 398 Pfam EamA-like transporter family 16 157 IPR000620 GO:0016020|GO:0016021
Lja4g4089 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 160 - -
Lja4g4089 398 PANTHER MTN21/EAMA-LIKE TRANSPORTER FAMILY PROTEIN, PUTATIVE-RELATED 15 359 - -
Lja4g4089 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 255 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g4089 Lja-Chr4 74151481 74158948 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g4089 15 343 Nodulin-like Gene Family AT1G25270 43.161 1.36e-93 283