Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g4088 ATGAATGATGCTAGGGAACTAGTGCGTGGGGTAAAGCCTGCCTTGTTGATGGTGTTGGTGCAGGTTGTATATGCTTCTGTGAATGTTCTATATAAGTTTGCCATCAATGATGGGATGAGCACTAGAGTGGTCACTGCCTACCGCCTTATTTTCGCAACGCCATTCACCATTTTTCTCGCTCTTATTTTTGAAAGAGAGAACAGGCCAAAGCTGACATGGAGGGTGCTTTTGATGTCATTCTTTTGTGGTCTATTTGGAGCAAGTTTGCTACACAACCTTTTCCTTGAGGCCTTGGACCTGGTGTCAGCAACATTTGCCTCTGCCATCTTCAACCTTGTTCCTGCAGTCACTTTCGTTGTGGCCATCTTATGCGGCTTGGAGAAGTTAAATATGCAAACCGCAGCAGGGAAGGTCAAGGTGTTAGGAACCATAGTAGGAATTGGTGGGGCAATGCTGCTGATATTTTTTAAAGGGGCAGAAATTAAAATATTTAGTGCCTTCCACATTAATCTCCTGCATAAAAATGGCCATGTAGCAAGAGTCCATACTGGTTCTGGTACTAAATTGTGGGGTGTTCTTTGTGCTTTTGGAAGCTGCTTCAGTTTTGCATTCTGGCTCATCATTCAGTCTAAGATGGGTACAGAGTATCCAAGAAAATACTCAAGCACGGCATTGATGATCTTAATGGGGGCAATTCAAGCCACAGTTTTTGCTCTTTGTGTTGAGAAGGATTGGAATCAATGGAGTTTGGGTTCGAGTATTAGGCTTGTAACTGTGGCCTATGCGGGCATTGCGGCCTCTGGAGTTATGGTTGTAGTCACTGCATGGTGCGTGAGGATGAGAGGCCCAGTGTTTGTATCTGTATTCAACCCTTTGTTGCTTGTGCTTGTGGCTATTGTAGGTGCCTTGATATTAGATGAGAACTTATATGTGGGAAGTGTAATTGGAGCTGTGCTAATTGTGTGTGGCTTGTACATGGTGCTATGGGGAAAGAGCAAAGAAACGGAAAAGGAGAATCAGTTGGGGTCATCAGAAGTCACCCAGAAATATGAAGCAACTCACGCTGTTGTCATTTCAACGACAACAAATAATGGCAATAGTGACGGCAGTAGTAACACCAATTGA 1125 0.44 MNDARELVRGVKPALLMVLVQVVYASVNVLYKFAINDGMSTRVVTAYRLIFATPFTIFLALIFERENRPKLTWRVLLMSFFCGLFGASLLHNLFLEALDLVSATFASAIFNLVPAVTFVVAILCGLEKLNMQTAAGKVKVLGTIVGIGGAMLLIFFKGAEIKIFSAFHINLLHKNGHVARVHTGSGTKLWGVLCAFGSCFSFAFWLIIQSKMGTEYPRKYSSTALMILMGAIQATVFALCVEKDWNQWSLGSSIRLVTVAYAGIAASGVMVVVTAWCVRMRGPVFVSVFNPLLLVLVAIVGALILDENLYVGSVIGAVLIVCGLYMVLWGKSKETEKENQLGSSEVTQKYEATHAVVISTTTNNGNSDGSSNTN* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g4088 374 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 156 - -
Lja4g4088 374 PANTHER WAT1-RELATED PROTEIN 12 358 IPR030184 GO:0016021|GO:0022857
Lja4g4088 374 Pfam EamA-like transporter family 13 154 IPR000620 GO:0016020|GO:0016021
Lja4g4088 374 Pfam EamA-like transporter family 189 328 IPR000620 GO:0016020|GO:0016021
Lja4g4088 374 PANTHER WAT1-RELATED PROTEIN 12 358 - -
Lja4g4088 374 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g4088 Lja-Chr4 74132183 74136069 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g4088 11 368 Nodulin-like Gene Family AT1G25270 39.665 1.62e-89 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g4088 - - gmx:100813812 504.597