Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g4087 ATGGGGAAGATAATGGAAGGACTGAAACCAGCACTACTCATGGTGTTTGTGCAGATTGCATATGCTGCAGTGAATATCGTCTACAAGCTCGCCATTAATGATGGAATGAGCATGACAGTCGCCACTGCCTACCGGCTAATTTTCGCATCAGCTTGCACGGTTCCACTTGCTCTTATCTTTGATAGGAAGAAGAGGCCAAAAATTACTTGGAGGGTGCTTGTTTTGGCATTTCTTTGTGGAATGTTTGGGGGAAGTTTATTTCTAAACCTTTACGCTGTGGGTTTGGGCATGACATCAGCAACGTTTATGTTGGCCGTGGTGAACCTTATTCCAGGCATTACCTTCATCTTGGCCACATGTTTCGGATTGGAAAAATTAAATTTGGGAGCAGCAGCAGGTAAGGCCAAGGTGATAGGAACAATTGTTGGAATTAGTGGAGCAATGGTGTTGACCTTTCTCAAAGGGTTCGAAATCAATATTTTGTCCTCCAAACTTGACCTTATGCATCCGCATCATGACCAAAGTGGCCATATAGTGTCGCAACATGTCGACTTTAGCAACAAAGCATTAGGGATTCCTTGCGCCTTAGCAAGTTGCATCTCTTTCTCTTTGTGGTTAATCACTCAAGCGAAGATGAACCAAGAATACCCGAGCCCTCACTCAAGCTCAGCATTGATGTGTATAATGGGTGCCTTACAATCCACTATTATTGCTCTTTGTTTTGAGAGGGATTGGAGTCAATGGAAGTTGGGGTTCGATATCAGACTTCTAACCGTGGCTTATTCGGGAATTGTGGGCTCTGGTTTGGTGGTTATTGTTATTGCATGGTGTGTAAAGATGAGAGGCCCTCTATTCGCGTCTATTTTCAATCCTCTACAACTCTTGCTTGTCGCCATCGCTGCTTACTTATTGTTGGATGAGAAGTTATATTTAGGAAGCAAAGAAATGAAAACGAAGACTCAGTTAATGCCAGTACAAAACACCACAGAGTCCCAAGTTATTGAGGTTGCTGTTATTTCCACGCCCGTAAATCAACATAAATGCGTCCACTGCAATCAGTGTCAAGTTAGTGCAACGTCGAATGTTGCTGATGACCAATCACTCTCTATCGAAAAATGA 1119 0.4316 MGKIMEGLKPALLMVFVQIAYAAVNIVYKLAINDGMSMTVATAYRLIFASACTVPLALIFDRKKRPKITWRVLVLAFLCGMFGGSLFLNLYAVGLGMTSATFMLAVVNLIPGITFILATCFGLEKLNLGAAAGKAKVIGTIVGISGAMVLTFLKGFEINILSSKLDLMHPHHDQSGHIVSQHVDFSNKALGIPCALASCISFSLWLITQAKMNQEYPSPHSSSALMCIMGALQSTIIALCFERDWSQWKLGFDIRLLTVAYSGIVGSGLVVIVIAWCVKMRGPLFASIFNPLQLLLVAIAAYLLLDEKLYLGSKEMKTKTQLMPVQNTTESQVIEVAVISTPVNQHKCVHCNQCQVSATSNVADDQSLSIEK* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g4087 372 Pfam EamA-like transporter family 9 150 IPR000620 GO:0016020|GO:0016021
Lja4g4087 372 Pfam EamA-like transporter family 190 311 IPR000620 GO:0016020|GO:0016021
Lja4g4087 372 PANTHER MTN21/EAMA-LIKE TRANSPORTER FAMILY PROTEIN, PUTATIVE-RELATED 9 313 - -
Lja4g4087 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 144 - -
Lja4g4087 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 311 - -
Lja4g4087 372 PANTHER WAT1-RELATED PROTEIN 9 313 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g4087 Lja-Chr4 74109792 74112074 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g4087 8 313 Nodulin-like Gene Family AT1G25270 44.118 3.86e-84 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g4087 - - gsj:114424758 461.07