Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g4086 ATGGGGAAGATAATGGAAGGACTGAAACCAGCATTACTCATGGTGTTTGTGCAGATTGCATATGCTGCAACGAATATCGTCTACAAGCTCGCCATAAATGATGGAATGAGCATGACGGTTGCTACTGCCTACCGCCTTATTTTCGCATCGACATGCACTATTCCACTTGCTCTTATCTTCGATAGGAAGAAGAGACCAAAAATTACTTGGAGGGTGCTTGTTTTGGCATTTCTTTGTGGCATGTTTGGGGGAAGTTTATTTCTAAACCTTTACGCTGTGGGTTTGGGCATGACTTCAGCAACGTTTATGTTGGCCGTGGTGAACCTTATTCCAGGCATTACCTTCATCTTGGCCACATGTTTCGGATTGGAAAAATTAAATTTGGGAGCAGCAGCAGGTAAGGCCAAGGTGATAGGAACAATTGTTGGAATTAGTGGAGCAATGGTGTTGACCTTTCTCAAAGGGTTCGAAATCAATATTTTGTCTTCCAAAATTGACCTTATGCATCCACATCACGACCAAAATGGCAATATAGTGTCGCAACATGTCGACTTTAGCAATAAAGCATTGGGAATTCCTTGCGCCTTAGCAAGTTGCATCTCTTTCTCTTTGTGGTTAATCACTCAAGCGAAGATGAACCAAGAATACCCGAGCCCTCACTCAAGCTCAGCATTGATGTGTGTAATGGGAGCCTTACAATCCACTATTATTGCTCTTTGTTTTGAGAGGGATTGGAGTCAATGGAAGTTGGGTTTTGATATCAGACTTCTAACCGTGGCTTATTCGGGAATTGTGGGCTCTGGTTTGGTGGTTATTGTTATTGCATGGTGTGTAAAGATGAGAGGCCCTCTATTCGCATCTATTTTCAATCCTCTACAACTTTTGCTTGTTGCCATCGCTGCTTACTTATTGTTGGATGAGAAGCTATATTTAGGAAGTGTGCTTGGAGCAGTGCTGATTGTTATTGGCCTATACGCTGTGCTTTGGGGTAAGAGCAAAGAAATGAAAACGAAGACTCAGTTAATTCCAGTACAAAACACCACAGAGTCCCAAGTTATTGAAGTTTCTGTTAGCTCCACGCCCGTAAGTCAACATAAATGCGTCCACTGCAATCAATGTCAAGCTAGTGCAACCTCAAATGTTACCAATGACCAATCACTATCTATCGAATAA 1173 0.4228 MGKIMEGLKPALLMVFVQIAYAATNIVYKLAINDGMSMTVATAYRLIFASTCTIPLALIFDRKKRPKITWRVLVLAFLCGMFGGSLFLNLYAVGLGMTSATFMLAVVNLIPGITFILATCFGLEKLNLGAAAGKAKVIGTIVGISGAMVLTFLKGFEINILSSKIDLMHPHHDQNGNIVSQHVDFSNKALGIPCALASCISFSLWLITQAKMNQEYPSPHSSSALMCVMGALQSTIIALCFERDWSQWKLGFDIRLLTVAYSGIVGSGLVVIVIAWCVKMRGPLFASIFNPLQLLLVAIAAYLLLDEKLYLGSVLGAVLIVIGLYAVLWGKSKEMKTKTQLIPVQNTTESQVIEVSVSSTPVSQHKCVHCNQCQASATSNVTNDQSLSIE* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g4086 390 PANTHER WAT1-RELATED PROTEIN 9 352 IPR030184 GO:0016021|GO:0022857
Lja4g4086 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 144 - -
Lja4g4086 390 Pfam EamA-like transporter family 190 328 IPR000620 GO:0016020|GO:0016021
Lja4g4086 390 Pfam EamA-like transporter family 9 150 IPR000620 GO:0016020|GO:0016021
Lja4g4086 390 PANTHER MTN21/EAMA-LIKE TRANSPORTER FAMILY PROTEIN, PUTATIVE-RELATED 9 352 - -
Lja4g4086 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g4086 Lja-Chr4 74098579 74101014 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g4086 8 339 Nodulin-like Gene Family AT1G25270 43.976 4.80e-93 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g4086 - - gmx:100803545 494.197