Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g4085 ATGGTGAACATGAATGGTGTGTGCCATTTAATGCAAGGGCTGAAACCAGCGCTGCTAATGTTGTTTGTGCAGGTTGCTTATGCGGCAGTTAATATCGTCTACAAGCTCGCCATAAACGATGGAATGAGCATGACGGTCGCCACTGCCTACCGCCTCACTTTTGCATCCGCCTTCACTGTCCCTCTTGCTCTTTTCTTTGATAGGAAGAAGAGGCCAAAAATTACTTGGAGGGTGCTTGTTTTGGCATTTCTGTGTGGAATGTTTGGGGGTAGTTTATTTCTAAATCTTTACGCCGTTGGTTTGGCTTTGACATCAGCAACTTTTATGTTGGCTGTGGTCAACCTTATTCCTGGTATTACCTTCATCATGGCTACATCTTTTGGATTGGAAAAATTAAATTTGGGAGCAGCAGAAGGGAAGGCCAAGGTGATGGGAACTATTGTTGGAATTAGCGGGGCAATGGTGCTAACCTTTCTCAAAGGGTTCGAAATTAATATTTTGTCTTCTAAAATTGACCTTATGCATCCACATCATGACCAAAGTGGGCATATGATGCGGCCTCATGTAGATTTTAGTAATAAACTATTAGGTGTTCCTTGCGCCATAGCAAGTTGCTGCTCTTTTTCTTTGTGGTTAATCACTCAGGCTAAGATGAACCAAGAATACCCGAGTCATCACTCAAGCTCAGCGTTGATGTCAACCATGGGAGCAATACAATCCATTGTTATTGCTCTTTGTTTTGATAGGGATTGGAGCCAATGGAAGCTGGGTTTTAATATCAGGCTTCTAACAGTGGCTTATTCGGGAATTGTGGGCTCTGGTATGGTGGTTGTTGTTATTGCGTGGTGCATAAAGATGAGAGGCCCTCTATTTGCGTCTATTTTCAATCCAGTGCAACTATTACTTGTCGCCATCGCTGCTTATTTATTGTTGGATGAGAAGTTGTATTTAGGAAGTGTGCTTGGAGCAGTGTTGATTGTCATTGGCCTATATGCGGTGCTTTGGGGTAAGAGCAAAGAAATGAAAAAGAAGACTCAATTAGTGCCAATACAAAACACCACAAAGGCCGAAGTTATTGAGGTCAAGAACAACTTCTCTCAATTCCTCTTGGTAAGGGGAGTTTACAGGCTACGAGGATTATATGATTCTCTGGCAGGAGGATCGCGTTTAATTATATTTAATTAG 1185 0.4236 MVNMNGVCHLMQGLKPALLMLFVQVAYAAVNIVYKLAINDGMSMTVATAYRLTFASAFTVPLALFFDRKKRPKITWRVLVLAFLCGMFGGSLFLNLYAVGLALTSATFMLAVVNLIPGITFIMATSFGLEKLNLGAAEGKAKVMGTIVGISGAMVLTFLKGFEINILSSKIDLMHPHHDQSGHMMRPHVDFSNKLLGVPCAIASCCSFSLWLITQAKMNQEYPSHHSSSALMSTMGAIQSIVIALCFDRDWSQWKLGFNIRLLTVAYSGIVGSGMVVVVIAWCIKMRGPLFASIFNPVQLLLVAIAAYLLLDEKLYLGSVLGAVLIVIGLYAVLWGKSKEMKKKTQLVPIQNTTKAEVIEVKNNFSQFLLVRGVYRLRGLYDSLAGGSRLIIFN* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g4085 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 157 - -
Lja4g4085 394 PANTHER WAT1-RELATED PROTEIN 14 358 IPR030184 GO:0016021|GO:0022857
Lja4g4085 394 PANTHER MTN21/EAMA-LIKE TRANSPORTER FAMILY PROTEIN, PUTATIVE-RELATED 14 358 - -
Lja4g4085 394 Pfam EamA-like transporter family 15 157 IPR000620 GO:0016020|GO:0016021
Lja4g4085 394 Pfam EamA-like transporter family 196 334 IPR000620 GO:0016020|GO:0016021
Lja4g4085 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 254 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g4085 Lja-Chr4 74054154 74063226 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g4085 14 364 Nodulin-like Gene Family AT1G25270 42.735 8.80e-96 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g4085 - - gmx:100803545 518.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g4085 4 74054154 74063226 Lja6g3324 6 61437853 61481330 PCT