Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g4083 ATGAACGGTGTGTGCAATTTAATGCAAGGGCTGAAACCAGCGTTACTAATGGTGTTTACGCAGATTGCATATGCTGCGGCGAATATCGTCTACAAGCTCGCCATAAATGATGGAATGAGCATGAGAGTTGCAACTGCTTATCGCCTCATTTTCGCATCGGCTTTCACAGTTCCACTTGCTCTTATCCTTGATAGGAAGAAGAGGCAAAAAATTACTTGGAGGGTGATTTTTATGGCATTTCTCTGTGGATTGTTTGGTGGAAGTTTATTTCTAAACCTTTACGCCGTTGGTTTGGCTTTGACCTCTGCAACGTTTATGTTGGCGGTGTTAAACCTTGTTCCAGGCGTTACATTCATCATGGCCACTTCTTTTGGATTGGAAAAACTGAATTTTGGAGCAGCAGAAGGGAAGGCCAAGGTGATAGGAACAGTTGTTGGAATTAGTGGTGCAATGTTGATTACCTTTCTCAAAGGGTTTGAAATTAATATTTTATCTTCCAAAATTGACCTTATGCATCCACATCATGACCAAAGTGGGCATATGATGCGGCCTCATGTAGATTTTAGTAATAAACTATTAGGGGTTCCATGCGCCTTAGCAAGTTGCTGCTCTTTCTCTTTGTGGTTAATCATTCAGGCTAAGATGAACCAAGAATATCCAAGCTATCACTCAAGCTCAGCTTTGATGTCAACAATGGGAGCAATACAATCTACTATTATTGCTCTTTGTGTTGATAGAGATTGGAGCCAATGGAAGTTAGGTTACAATATCAGGCTGCTAACCGTGGCTTATTCGGGAATTGTGGCTTCTGGTATGGTGGTTATTGTAATTTCGTGGTGCGTGAAGATGAGAGGTCCTCTATTTGCATCCATCTTTAATCCTCTACAACTTTTGCTTGTGGCAATCGCTGCTTATTTATTATTGGATGAGAAATTATATTTAGGAAGTGTGGTTGGAGCAGTACTGATCGTGTGTGGCTTATATGGTGTGCTATGGGGTAAGAGCAGAGAAATGAAAAAGAAGACTCAACTAGTGCCATTAGATCAAAACACCACGGAGCCCGAAGTCATTGAAGTTACTGTTATGTCCACGCCTGAAAATTGTGACAAATGTGTCCAGAGCTACCAAAGTCAAACTAGTTAG 1143 0.4121 MNGVCNLMQGLKPALLMVFTQIAYAAANIVYKLAINDGMSMRVATAYRLIFASAFTVPLALILDRKKRQKITWRVIFMAFLCGLFGGSLFLNLYAVGLALTSATFMLAVLNLVPGVTFIMATSFGLEKLNFGAAEGKAKVIGTVVGISGAMLITFLKGFEINILSSKIDLMHPHHDQSGHMMRPHVDFSNKLLGVPCALASCCSFSLWLIIQAKMNQEYPSYHSSSALMSTMGAIQSTIIALCVDRDWSQWKLGYNIRLLTVAYSGIVASGMVVIVISWCVKMRGPLFASIFNPLQLLLVAIAAYLLLDEKLYLGSVVGAVLIVCGLYGVLWGKSREMKKKTQLVPLDQNTTEPEVIEVTVMSTPENCDKCVQSYQSQTS* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g4083 380 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 155 - -
Lja4g4083 380 SUPERFAMILY Multidrug resistance efflux transporter EmrE 255 336 - -
Lja4g4083 380 Pfam EamA-like transporter family 12 154 IPR000620 GO:0016020|GO:0016021
Lja4g4083 380 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020|GO:0016021
Lja4g4083 380 PANTHER WAT1-RELATED PROTEIN 12 354 IPR030184 GO:0016021|GO:0022857
Lja4g4083 380 PANTHER MTN21/EAMA-LIKE TRANSPORTER FAMILY PROTEIN, PUTATIVE-RELATED 12 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g4083 Lja-Chr4 74022497 74026068 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g4083 11 356 Nodulin-like Gene Family AT1G25270 40.401 1.47e-92 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g4083 - - gmx:100803545 507.294