Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g4082 ATGAAAGGTTTATGGGTAGGGTTGCAAGGGTTGAGCCCTGTTCTGCTAATGGTGGCGGTTCAGATTGTTTATGCTTCTGCAAATGTTCTCTACAAGGTTGTCTTAAACGATGGAATGAGCGTTAGTGTAATCACTGCCTATCGCCTCATGTTCGGTGCTGCTTGCACTATTCTTCTTTCTCTTATTTTTGAAAGAAAGAACAGGCCAAAGCTGACATGGAGGGTGCTTTTCATGACATTTCTTTCCGGCCTATTTGGAGGGACTCTATTCCAAAACCTCTTTGTCAATGCTATCTCTCTGATATCAGCAACATTTGCTACTGCCATTTATAATCTCGTTCCTGGAATCACATTTATGTTGGGCATCTTTTTCGGCTTCGAACAGTTAAACATAGGAAGAGCAGCAGGGCAGGTGAAGTTGTTGGGAACAATAGTTGGAATTGGTGGATCAATGCTGCTGACATTTTTCAAAGGGGCAGAAATTCACATTTGGACCTCCCACATTAATCTTTTGCATCAAAATCAAAATGGCCACGGAGGAACACAGAATGTTGACACTAGAACAAAAACAATCGGTGTTTTATGTGGTATTGGAAGCTGCATAAGCTTTTCATTCTGGCTCATCATCCAGGCTAAGATTGCTAAAGAATATCCAAGACAATACACAAGCACGGCCTTGATGACCTTAATGGCGGCAATACAATGTACTGTCTTCGCCCTTTGGGTTGAGAAGGATTGGAGCCAATGGAAGTTAGGTTGGAGTCTTAGGCTTCTAACCGCAACTTACTCGGGAATTATGTCCTCTGGAGTGGTGTATGTTGCCACTGCATGGTGTGTACGGGTGAGAGGTCCCATGTTTGCATCTGTTTTCAACCCTCTTACCCTTATTATTGTGGCTATTGGTAGTTCCCTGGTTTTGAATGAGAAGATATACTTAGGAAGTGTTATCGGAGGAGTGCTAATTGTGTGTGGCTTGTACATGGTGCTTTGGGGTAAGAGTAAAGAAACAAAAAAGAGGAAGGACTTGGTGTCAGAAAATACCCAAGAAGTTGAAGCTACTGATGTTGTTTCCATACATCATGGCAATTGTGACACCAGCAACAATAGCTGCACCAATAGTAAGAGCAATAATAATGTTGTTTCAAAGTTTCACGATGAATCTTCTAAAAGTGAGCATCAACCAAATGGCATTGACAATGAGGGGGCACAAGATGTAATGGCTTCAGGGGAAATCTCTAGAGAGGATACAGAAGGCTCAGGACTATCAGCACCTTTTGGAATTGAACAAAATCTGCATAAACCTGCTGCTTAA 1311 0.4218 MKGLWVGLQGLSPVLLMVAVQIVYASANVLYKVVLNDGMSVSVITAYRLMFGAACTILLSLIFERKNRPKLTWRVLFMTFLSGLFGGTLFQNLFVNAISLISATFATAIYNLVPGITFMLGIFFGFEQLNIGRAAGQVKLLGTIVGIGGSMLLTFFKGAEIHIWTSHINLLHQNQNGHGGTQNVDTRTKTIGVLCGIGSCISFSFWLIIQAKIAKEYPRQYTSTALMTLMAAIQCTVFALWVEKDWSQWKLGWSLRLLTATYSGIMSSGVVYVATAWCVRVRGPMFASVFNPLTLIIVAIGSSLVLNEKIYLGSVIGGVLIVCGLYMVLWGKSKETKKRKDLVSENTQEVEATDVVSIHHGNCDTSNNSCTNSKSNNNVVSKFHDESSKSEHQPNGIDNEGAQDVMASGEISREDTEGSGLSAPFGIEQNLHKPAA* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g4082 436 MobiDBLite consensus disorder prediction 369 436 - -
Lja4g4082 436 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 156 - -
Lja4g4082 436 MobiDBLite consensus disorder prediction 369 383 - -
Lja4g4082 436 PANTHER WAT1-RELATED PROTEIN 12 364 - -
Lja4g4082 436 SUPERFAMILY Multidrug resistance efflux transporter EmrE 230 334 - -
Lja4g4082 436 Pfam EamA-like transporter family 191 329 IPR000620 GO:0016020|GO:0016021
Lja4g4082 436 Pfam EamA-like transporter family 12 140 IPR000620 GO:0016020|GO:0016021
Lja4g4082 436 PANTHER WAT1-RELATED PROTEIN 12 364 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g4082 Lja-Chr4 74002850 74006007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g4082 11 360 Nodulin-like Gene Family AT1G25270 39.437 1.26e-92 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g4082 - - lja:Lj4g3v0336250.1 839.721