Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g4080 ATGGCTGCTGGTGCACCCAACCATGTAGGTACAATTCCAAACCCTGCAAATGGAACCACTGATCAGAACAAGCAAACACAAGTGACTGATGTTCCCCGCAACGTTGTTGACTACTGGCAGAGGGCTCAATGGCTTCGTGCTGCGGTGTTAGGCGCCAATGACGGTTTGGTTTCTGTTGCTTCACTGATGATGGGCGTAGGAGCTGTCAATAAAGATGCCAAAGCAATGCTGCTCGCGGGTTTCGCCGGATTAGTTGCAGGAGCTTGTGGAATGGCAATAGGTGAGTTTGTTTCTGTGTTTACACAGTATGAAGTCGAGGTTGGGCAAATGAAAAGAGACATGATCAAGAGTGAGCAAGGAGAGAGGGACTTGGAGATGGCGATGGAGAAAAGGAAATCCATACCTAATCCAATGCAGGCTGCTTTGGCATCTGCATTCTCATTCTCTATAGGTGGATTGGTTCCTTTACTTTCAGGTTCGTTCGTCTCAGTTTACAAGATAAGGCTTCTTGTGATTGTGGTGGTTGTTAGCTTGGCTTTGGTGGCTTTTGGTAGCGTGGGTTCTCTGCTGGGAAAGACTCCCATGACGAGATCTTGTGTGAGGTTCATGATTGGGGGATGGATGGCCATGGCTATCACTTTTGGGTTAACAAAATTGCTAAGTGCTGGTGGGTTGGAAATATAA 684 0.4737 MAAGAPNHVGTIPNPANGTTDQNKQTQVTDVPRNVVDYWQRAQWLRAAVLGANDGLVSVASLMMGVGAVNKDAKAMLLAGFAGLVAGACGMAIGEFVSVFTQYEVEVGQMKRDMIKSEQGERDLEMAMEKRKSIPNPMQAALASAFSFSIGGLVPLLSGSFVSVYKIRLLVIVVVVSLALVAFGSVGSLLGKTPMTRSCVRFMIGGWMAMAITFGLTKLLSAGGLEI* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g4080 227 MobiDBLite consensus disorder prediction 12 27 - -
Lja4g4080 227 MobiDBLite consensus disorder prediction 1 27 - -
Lja4g4080 227 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 21 221 IPR008217 GO:0005384|GO:0030026
Lja4g4080 227 Pfam VIT family 45 116 IPR008217 GO:0005384|GO:0030026
Lja4g4080 227 Pfam VIT family 114 217 IPR008217 GO:0005384|GO:0030026
Lja4g4080 227 CDD Nodulin-21 43 194 - -
Lja4g4080 227 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 2.1 21 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g4080 Lja-Chr4 73984218 73985132 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g4080 14 225 Nodulin-like Gene Family AT3G43660 56.604 5.26e-79 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g4080 K22736 - gmx:100791523 266.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g4080 4 73984218 73985132 Lja4g4080 4 73984218 73985132 ECH