Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g4078 ATGGCCTCCCTTGGAACTAATGGAGTTTCCTCAAACCATGTTGAGATCCCTATCCATTGCAATATTATTATTATGGGGCCAAAACAAAGCCTAGAGGTTGAAGAGAGCAACAATATTGACTACTCTGGAAGAGCTCAGTGGGTCCGAGCAGCTGTGTTGGGTGCGAATGATGGGTTGGTCTCAGTAGCCTCTCTGATGATGGGTGTTGGAGCTATAAAGGAAGATGTGAGTGCCATGCTTCTTGCTGGTTTTGCTGGGTTGGTAGCTGGAGCTTGTAGCATGGCAATTGGAGAGTTTGTCTCTGTCTACACTCAGTATGACATAGAGAAAGCTCAGATTAAAAGAAAGAGGGAAGCTGATAATAATAACAATAATAAAGGGCTAAGTAAGCTCAAAGGGAGAAACTTCCCAACCCATTTCAGGCTGCATGCCCTAGCATCAGCACTTGCATTTTCTGTGGGTGCTCTGGTGCCACTGATAGCAGCTGTGTTTATAAGGAATCACATGATTAGGCTTGGTGTTGTTGCAGCTGTGGCTAGCTTGGCATTATTGGTATTTGGAGTGGTTGGAGCAGTGCTTGGAAAAACCCCAGTGATGAGGTCTTGTTTCAGGGTGCTGATTGGAGGTTGGATGGCTATGGCCATAACATTTGGCCTCACCAAATTGATTGGATCTTCTGGTCTTTGA 687 0.4541 MASLGTNGVSSNHVEIPIHCNIIIMGPKQSLEVEESNNIDYSGRAQWVRAAVLGANDGLVSVASLMMGVGAIKEDVSAMLLAGFAGLVAGACSMAIGEFVSVYTQYDIEKAQIKRKREADNNNNNKGLSKLKGRNFPTHFRLHALASALAFSVGALVPLIAAVFIRNHMIRLGVVAAVASLALLVFGVVGAVLGKTPVMRSCFRVLIGGWMAMAITFGLTKLIGSSGL* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g4078 228 PANTHER VACUOLAR IRON TRANSPORTER-LIKE PROTEIN 5 225 - -
Lja4g4078 228 CDD Nodulin-21 46 197 - -
Lja4g4078 228 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 5 225 IPR008217 GO:0005384|GO:0030026
Lja4g4078 228 Pfam VIT family 48 126 IPR008217 GO:0005384|GO:0030026
Lja4g4078 228 Pfam VIT family 143 220 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g4078 Lja-Chr4 73921896 73936590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g4078 30 228 Nodulin-like Gene Family AT3G43660 61.307 8.35e-83 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g4078 K22736 - gmx:100809524 284.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g4078 4 73921896 73936590 Lja4g4078 4 73921896 73936590 ECH