Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g4073 ATGGACGACTTGTCCAAGAACCAGATTTTTGCTGTTCATGGGATTGCTGGTGCTGGGTCAGTGGCTTTAGCCACAGGTTTTACCTATCCTCTGGATACCATTAAAGTCCTCACTCAGGTTGGTTCCAGTGCCGGTAAAGAATTGAATGCTGCTGAGGTTTTAATGAGAGTACTCTCTGTGTCGGGTAATGCAGGTCTGTTCAGTGGTTATGGCTGGTTGGCTTTTGGAAGGACTTTTGGTTTGGGAGCACGTTTTGGGGTTTATGAAATCCTGGCAGCCTTTTCTAAAGATGGTCGGGAAGATAATTATGTCTATCCTTCAGAGGCTCTTTTGGCTGGCATGGCAGCTGGTGCCATAGAGACATTCATAAGCTCTCCATTTGAACTCATTAAGCTTCGTATGCAAGTTAGCTCTGCTTCATACATTCCAAGCTCTAACTTTGCTTTGGAAGAGGGGGGCCGCAAACCTTTAGTTGCAAGATTACTTAATGGCTGTCATCCAGAAAAGAGGTCTTTGAACCAATATGTTGATCTCATCTCCACCCTAAAACCCAAAAATGCTAACTTAGAGGGTGCTTTACTGGAGTATCCATGGACCATGACAGGATCTGGGAAGCCACCATCAGTTTGCAATGTGAGAAGGCCATCAGATATTATATCTTTGGAAGGATGGAGTACATTATGGAGAGGTTTCCGTTCTGGACTTGTTCGAGATTCTGTGTTTGGTGGTATATTTTTTTCAAGTTGGCAACTTTTGCACCAAGCCATGCTTGATTGGAAGGCTGTAGGGATGAATCCTCCACCCAGGTTAAATGAAGAGGTTGGTCCGTTGTCTCCTTTGGCCGTTAGCCTTGCTGCTGGAGTTTCAGGTTCAGTTGCTGCTGCTGCTTCTCATGGTTTTGATACTGCAAGAACTAGAACACAATGTACTGTTCTTCCAAAGTATGTCTCTATGGAGAGAAAGTTCTTGAAGTGGAAACGGCTGGGAAACAAGTTTGAAAGAATTACTGGGATCCATCCTTCTGACAGAAATGTCTTGTTCCGGGGTGTTGGGTTGCGGATGGCTCGCTCTGGTCTTGCATCATTCATGGTTGTAGGAAGTTATTTCTTTGTTGTTGACCATCTTGCTTCTAGTTTGACTTAA 1143 0.4444 MDDLSKNQIFAVHGIAGAGSVALATGFTYPLDTIKVLTQVGSSAGKELNAAEVLMRVLSVSGNAGLFSGYGWLAFGRTFGLGARFGVYEILAAFSKDGREDNYVYPSEALLAGMAAGAIETFISSPFELIKLRMQVSSASYIPSSNFALEEGGRKPLVARLLNGCHPEKRSLNQYVDLISTLKPKNANLEGALLEYPWTMTGSGKPPSVCNVRRPSDIISLEGWSTLWRGFRSGLVRDSVFGGIFFSSWQLLHQAMLDWKAVGMNPPPRLNEEVGPLSPLAVSLAAGVSGSVAAAASHGFDTARTRTQCTVLPKYVSMERKFLKWKRLGNKFERITGIHPSDRNVLFRGVGLRMARSGLASFMVVGSYFFVVDHLASSLT* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g4073 380 PANTHER CARRIER PROTEIN 2 376 - -
Lja4g4073 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 104 255 IPR018108 -
Lja4g4073 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 8 94 IPR018108 -
Lja4g4073 380 Pfam Mitochondrial carrier protein 107 141 IPR018108 -
Lja4g4073 380 Pfam Mitochondrial carrier protein 10 93 IPR018108 -
Lja4g4073 380 SUPERFAMILY Mitochondrial carrier 11 366 IPR023395 -
Lja4g4073 380 Gene3D Mitochondrial carrier domain 10 379 IPR023395 -
Lja4g4073 380 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 2 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g4073 Lja-Chr4 73867352 73872498 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g4073 29 258 Antiporters AT1G79900 23.755 6.10e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g4073 - - gmx:100813634 607.831