Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g4064 ATGGATGTGCTATCCTTAAGCTCAAGCCTAAGCATTTCCAAGCCACTTCATTCCTTTCCACACTCTAGTAAACAGCAAAGAACTTTTCTGGTGAACTTTGCAATTTCATGCAGAGGAGCTACAAAGCTAAAGGAAGAAACCACCCATGGAAACCTCTATAAAGTGTTGTCCTTGAAACCCGGAAGTGCGATGGATGAGATAAAGAGAGCATACAGATCAATGGCTCTTCAGTACCACCCTGATGTGTGCCATGATCCTTCCATGAAAGAGGAGTCAACGAAGATGTTTGTTCAACTAAATGAAGCTTACAAGACACTGTCAAATCCCCTGCTTAGAGAACAATATGACAGTGAATTGGGTTTCAGAAGTGAAATGAATATTAATGTTAGTGATGAGGGGTTGAGAAGTATGTGGCAGGAGCAAGTGGTTCATGATATGAACATGAAGACAAAGTCTCGCAGACGCATGGGACAAAAAGGGGGATCATGGAGCAGCAGAATGAAGACACAGAACATGGAAAACAAGAACTAG 531 0.4218 MDVLSLSSSLSISKPLHSFPHSSKQQRTFLVNFAISCRGATKLKEETTHGNLYKVLSLKPGSAMDEIKRAYRSMALQYHPDVCHDPSMKEESTKMFVQLNEAYKTLSNPLLREQYDSELGFRSEMNINVSDEGLRSMWQEQVVHDMNMKTKSRRRMGQKGGSWSSRMKTQNMENKN* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g4064 176 PRINTS DnaJ domain signature 71 86 IPR001623 -
Lja4g4064 176 PRINTS DnaJ domain signature 53 71 IPR001623 -
Lja4g4064 176 PRINTS DnaJ domain signature 91 111 IPR001623 -
Lja4g4064 176 SUPERFAMILY Chaperone J-domain 48 115 IPR036869 -
Lja4g4064 176 Gene3D DnaJ domain 40 156 IPR036869 -
Lja4g4064 176 MobiDBLite consensus disorder prediction 157 176 - -
Lja4g4064 176 ProSiteProfiles dnaJ domain profile. 51 119 IPR001623 -
Lja4g4064 176 Pfam DnaJ domain 51 116 IPR001623 -
Lja4g4064 176 CDD DnaJ 51 108 IPR001623 -
Lja4g4064 176 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 5 175 - -
Lja4g4064 176 MobiDBLite consensus disorder prediction 149 176 - -
Lja4g4064 176 SMART dnaj_3 50 111 IPR001623 -
Lja4g4064 176 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 5 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g4064 Lja-Chr4 73781284 73782158 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g4064 53 117 C2H2 Transcription Factor Family AT1G74250 41.791 2.40e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g4064 - - lja:Lj3g3v2385410.1 312.383