Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g4062 ATGGATGTTCTAACTTTAAGCTCAAGCTCAAGCCTAAGCATTTCCAAGACATTTCATTGCCTTCCACAGTCTAGTAAACAGCAAAGAACTTCTCAGGTTCACTTTGCTATTTCTTGCAGAGGAGCTACAAAGCTAAAGGAAGAAACCACCTATGGAAACCTCTACAAAGTTTTGTCCTTGAAACCCGGAAGTGCCATGGATGAGATAAAGAGAGCATACAGATCAATGGCTCTTCAGTACCACCCTGATGTGTGCCATGATCCTTCCATGAAAGAGGAGTCAACAAGGATGTTTGTTCAGCTAAATGCAGCTTACAAGACACTGTCAAATCCCCTGCTTAGAGAACAGTATGACAGTGAAATTAATTTGGGTTTCAGAAGTGAAATGAAAGTTTGTGATGATGATGAGGGGTTGAGAAGTAGGTGGCAAGAGCAAGTGGTTGAGTTGAAGACAAGGTCTCGCAGACGCATGGGACAACAAGGGGGGTCATGGAGCAGCAGAATGAGGACACAGAACATGAAAAACAGGAACTAG 534 0.4326 MDVLTLSSSSSLSISKTFHCLPQSSKQQRTSQVHFAISCRGATKLKEETTYGNLYKVLSLKPGSAMDEIKRAYRSMALQYHPDVCHDPSMKEESTRMFVQLNAAYKTLSNPLLREQYDSEINLGFRSEMKVCDDDEGLRSRWQEQVVELKTRSRRRMGQQGGSWSSRMRTQNMKNRN* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g4062 177 PRINTS DnaJ domain signature 93 113 IPR001623 -
Lja4g4062 177 PRINTS DnaJ domain signature 73 88 IPR001623 -
Lja4g4062 177 PRINTS DnaJ domain signature 55 73 IPR001623 -
Lja4g4062 177 SUPERFAMILY Chaperone J-domain 32 117 IPR036869 -
Lja4g4062 177 Pfam DnaJ domain 53 118 IPR001623 -
Lja4g4062 177 MobiDBLite consensus disorder prediction 156 177 - -
Lja4g4062 177 Gene3D DnaJ domain 42 146 IPR036869 -
Lja4g4062 177 CDD DnaJ 53 110 IPR001623 -
Lja4g4062 177 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 3 176 - -
Lja4g4062 177 SMART dnaj_3 52 113 IPR001623 -
Lja4g4062 177 MobiDBLite consensus disorder prediction 152 177 - -
Lja4g4062 177 ProSiteProfiles dnaJ domain profile. 53 121 IPR001623 -
Lja4g4062 177 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 3 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g4062 Lja-Chr4 73775893 73776648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g4062 55 119 C2H2 Transcription Factor Family AT1G74250 43.284 4.13e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g4062 - - lja:Lj3g3v2385410.1 235.343