Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g4050 ATGGGAGACGTGGCTAAGGACCTCGCAGCTGGGACTGTTGGAGGGGCATCACAATTGATAGTTGGACACCCCTTTGACACCATCAAGGTCAAGCTCCAAAGCCAGCCTACACCACTCCCCGGTCAGCCTCCCAAGTTTTCTGGTGCATTTGATGCCGTCAAGCAGACAATAGCAGCTGAAGGTCCGAGGGGTTTATTCAAAGGTATGGGTGCCCCGCTTGCTACGGTAGCAGCCTTCAATGCTGTCCTGTTTACAGTGAGGGGACAAATGGAAACAATAGTGAGGTCCCATCCTGGTGCTCCCCTCACAGTCAGTCAGCAGTTTATTTGTGGAGCTGGAGCTGGAGTTGCTGTTTCCTTTCTTGCTTGCCCAACTGAATTAATCAAATGCAGGTTGCAAGCACAAAGTGCACTTGGTGGCTCCGGAGCAGCTGCTGTGGCTGTTAAGTACGGAGGACCCATGGATGTGGCCAGGCAGGTTCTCCGGTCAGAGGGGGGCACGAGAGGTCTTTTCAAGGGCTTGGTTCCCACCATGGCACGTGAGATACCTGGAAATGCTATCATGTTTGGTGTATATGAAGCAATAAAGCAACAGATTGCCGGAGGCACTGATACTTCTGGACTAGGTAGAGGTTCTCTGATTGTTGCAGGAGGCTTGGCTGGAGCTTCCTTCTGGTTCCTGGTTTACCCAACTGATGTTGTTAAAAGTGTGATTCAAGTAGATGACTACAAAAACCCAAAGTTTTCTGGCTCATTAGATGCTTTCAGAAAGATTCAAGCTACAGAGGGGTTCAAAGGCCTTTATAAAGGTTTTGGACCTGCAATGGCCCGAAGTATTCCTGCAAATGCAGCTTGCTTCTTGGCATATGAGATGACAAGATCAGCATTGGGATGA 894 0.4966 MGDVAKDLAAGTVGGASQLIVGHPFDTIKVKLQSQPTPLPGQPPKFSGAFDAVKQTIAAEGPRGLFKGMGAPLATVAAFNAVLFTVRGQMETIVRSHPGAPLTVSQQFICGAGAGVAVSFLACPTELIKCRLQAQSALGGSGAAAVAVKYGGPMDVARQVLRSEGGTRGLFKGLVPTMAREIPGNAIMFGVYEAIKQQIAGGTDTSGLGRGSLIVAGGLAGASFWFLVYPTDVVKSVIQVDDYKNPKFSGSLDAFRKIQATEGFKGLYKGFGPAMARSIPANAACFLAYEMTRSALG* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g4050 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 208 295 IPR018108 -
Lja4g4050 297 SUPERFAMILY Mitochondrial carrier 3 290 IPR023395 -
Lja4g4050 297 Gene3D Mitochondrial carrier domain 2 296 IPR023395 -
Lja4g4050 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 93 IPR018108 -
Lja4g4050 297 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 1 297 - -
Lja4g4050 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 102 198 IPR018108 -
Lja4g4050 297 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 1 297 - -
Lja4g4050 297 Pfam Mitochondrial carrier protein 102 199 IPR018108 -
Lja4g4050 297 Pfam Mitochondrial carrier protein 4 94 IPR018108 -
Lja4g4050 297 Pfam Mitochondrial carrier protein 214 296 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g4050 Lja-Chr4 73662625 73665414 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g4050 22 296 Antiporters AT1G79900 33.214 3.92e-42 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g4050 K15109 - gmx:100791908 520.776