Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g4046 ATGCGAAGCCCTAGTAGTACCCATTTCACGAGTGAGGATGGGGATCCAGAGAGAGCATTGTCCGTCGACTCCACCGAATCCAGGTGGGTTTTCCAGGAGGACGACGACGGCGATCCCTCCGAGATTGAGGAATTCGATCCTTCTTATCTGCGTCACCAGTCCATGTTCGATTCCGAGGATGAGGATTACGGCGACCAGAAGCTCGTTCGGACTGGCCGCCGAGTCGATTCCTTCGATGTTGAAGCGCTTGAGGTTCCCGGTGTTATCAGAAATGACTATGAGGATATAAGCGTTGGGAAGATGATACTTCTGGGTTTTCAAACTCTTGGTGTTGTTTTTGGTGATGTTGGAACTAGTCCTCTATATACTTTCAGTGTTATGTTTAGGAAGGCGCCTATTAATGGAAATGAAGACATTCTTGGAGCATTGTCTCTTGTGTTGTATACTTTAATATTGATTCCCTTGGTGAAGTATGTTCTTGTTGTTCTGTGGGCTAATGATGATGGTGAAGGTGGTACGTTTGCATTGTACTCCTTGATTTGCCGAAATGCTAAGGTGAGTCTTCTTCCCAATCAGCTGCGGTCAGATGCTCGAATATCAGGTTTTAGGCTGAAAGTGCCGTCCGCTGAGCTTGAAAGGTCTTTAAAAATCAAGGAAAGACTAGAGACTTCACAGACTTTGAAGAAGATTCTACTATTATTAGTTCTTGCTGGTACTTCTATGGTGATAGCTAATGGGGTTGTTACACCAGCAATGTCAGTACTATCATCAGTTAATGGTTTGAAAGTTGGGGTAGATGCAATTCATCAAGATCAGGTGGTGATGATTTCTGCTACTTGTCTTGTCATTTTGTTCACAGTACAAAAGTATGGAACAAGTAAAGTGGGGCTTGCTGTTGGACCTGCTTTGTTTATATGGTTTTGTTTTCTTGCGGGCATTGGCATATACAATCTTGTCAAATATGACAGCAGCGTTTTCAGGGCATTTAATCCTATTCACATCTATTATTATTTTGAAAGGAATTCAACTAAAGCATGGTATTCTCTTGGGGGATGTCTTCTGTGTGCAACTGGCTCTGAAGCCATGTTTGCAGATCTTTGCTACTTCCCTGTTCGAGCAGTTCAGCTTACATTTGTATTTCTTGTTTTGCCATGCCTACTATTGGGTTATTTGGGTCAAGCTGCATACCTTATGGAAAACCATGCTGATGGTGGCCAAGCCTTTTTTTCTTCTGTTCCAAGTGGTGCATTTTGGCCGACTTTCCTCGTTGCTAACATTGCTGCCCTAATTGCAAGTCGGGCCATGACAACAGCTACATTTTCGTGCATAAAACAGTCAATTGCACTTGGTTGTTTCCCTCGTCTTAAAATAGTTCATACCTCTCGGAAATTTATGGGCCAGATCTATATCCCTGTCATTAACTGGTTTCTCTTGGCTGTTTCTCTGGTGTTAATCTGCTCTATTTCCAGCATTGATGAAATCGGAAATGCATATGGCATTGCTGAGCTGGGGGTGATGATGATGACCACTATTTTAGTAACTCTTGTTATGCTTCTTATATGGCAGATACACATCATCATAGTGCTGAGTTTCTTGGTAGTCTTCTTAGGATTGGAGTTGACTTTCTTTTCATCGGTTTTGGGGAGCGTGGCAGATGGAAGTTGGATTATATTGGTCTTTGCTGTAATAATGTTTTTTATAATGTTTGTATGGAATTACGGAAGCAAGCTCAAGTATGAAACTGAGGTCAAGCAAAAACTGTCTAATGATTTAATGCGAGAATTAGGCTGCAATCTTGGGACAATACGTGCTCCTGGGATTGGTTTGCTCTATAATGAGTTGGTCAAAGGAATTCCAGGAATATTTGGTCATTTTCTAACCACACTTCCAGCAATACACTCCATGATCATATTTGTGAGTATTAAGTATGTTCCAGTTTCTGTGGTGCCCCAGAGGGAAAGGTTCCTTTTTCGGCGAGTCTGCCAGAGAAGCTATCATATGTTTCGTTGTATTGCCAGGTATGGCTACAAAGATGTTCGCAAAGAAAATCACCAGACTTTTGAGCAGATGCTGATGGAGAGCCTAGAGAAGTTTATACGCCGTGAAGCTCAGGAGAGGTCACTAGAGAGTGATGGGAATGATGATACTGAGTCAGAGGATGAGTACTCTGGTTCTAGGGTTCTTATAGCTCCCAATGGGAGTGTTTACTCACTCGGGGTTCCTCTTCTTGCTGATTTTAATGATATAGGCAAATCCATTTTCGAAGCAAGCACATCAGAAGAAGTAAACAACACATCTCCTAAGCCCCCAGTGCTTGACGCTGAGCAAAGTCTTGAAAGAGAGTTATCTTTTATACGCATGGCCAAGGAGTCTGGATTGGTTTATCTTCTTGGTCATGGGGATATAAGGGCAAGAAAAGACTCCTGGTTTATCAAGAAGCTAATGATAAACTATTTTTATGCTTTTCTGAGGAAAAACTGCAGAAGGGGGATCACAAATTTAAGTGTACCCCATTCACATCTTATGCAGGTTGGTATGACTTACATGGTTTGA 2553 0.4219 MRSPSSTHFTSEDGDPERALSVDSTESRWVFQEDDDGDPSEIEEFDPSYLRHQSMFDSEDEDYGDQKLVRTGRRVDSFDVEALEVPGVIRNDYEDISVGKMILLGFQTLGVVFGDVGTSPLYTFSVMFRKAPINGNEDILGALSLVLYTLILIPLVKYVLVVLWANDDGEGGTFALYSLICRNAKVSLLPNQLRSDARISGFRLKVPSAELERSLKIKERLETSQTLKKILLLLVLAGTSMVIANGVVTPAMSVLSSVNGLKVGVDAIHQDQVVMISATCLVILFTVQKYGTSKVGLAVGPALFIWFCFLAGIGIYNLVKYDSSVFRAFNPIHIYYYFERNSTKAWYSLGGCLLCATGSEAMFADLCYFPVRAVQLTFVFLVLPCLLLGYLGQAAYLMENHADGGQAFFSSVPSGAFWPTFLVANIAALIASRAMTTATFSCIKQSIALGCFPRLKIVHTSRKFMGQIYIPVINWFLLAVSLVLICSISSIDEIGNAYGIAELGVMMMTTILVTLVMLLIWQIHIIIVLSFLVVFLGLELTFFSSVLGSVADGSWIILVFAVIMFFIMFVWNYGSKLKYETEVKQKLSNDLMRELGCNLGTIRAPGIGLLYNELVKGIPGIFGHFLTTLPAIHSMIIFVSIKYVPVSVVPQRERFLFRRVCQRSYHMFRCIARYGYKDVRKENHQTFEQMLMESLEKFIRREAQERSLESDGNDDTESEDEYSGSRVLIAPNGSVYSLGVPLLADFNDIGKSIFEASTSEEVNNTSPKPPVLDAEQSLERELSFIRMAKESGLVYLLGHGDIRARKDSWFIKKLMINYFYAFLRKNCRRGITNLSVPHSHLMQVGMTYMV* 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g4046 850 TIGRFAM kup: potassium uptake protein 104 850 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lja4g4046 850 MobiDBLite consensus disorder prediction 1 46 - -
Lja4g4046 850 Pfam K+ potassium transporter 106 678 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lja4g4046 850 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 29 849 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lja4g4046 850 MobiDBLite consensus disorder prediction 11 35 - -
Lja4g4046 850 PANTHER POTASSIUM TRANSPORTER 29 849 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g4046 Lja-Chr4 73617354 73623478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g4046 21 850 Inorganic Solute Cotransporters AT5G09400 77.844 0.0 1296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g4046 - - lja:Lj4g3v0341070.1 1621.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g4046 4 73617354 73623478 Lja6g3281 6 61152205 61157986 PCT