Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g4017 ATGGTTAAGGCTGGCAGGTCTTTGCCTCGTCCACATCATGTGGCTTGGCAATCACCTTATTCGAATTTCTCAAGTGTGCTGCCGAACCCTACCTTACTTGGTGTTCCAGCATATCTAAATTCTAGCACTTGCAATTTTCCCACGGTCGGTACACTTCCCAGACTTGCAGCTCCTGCTATCCCAAGTCTGAAGTCTGAGCTTACAAATGAAGCGAAAGGGTTCCTTCACTACCCCAGTGTCGAAACAGGTTTCAAAGAAACACATACTGTAGGAGCATTTCAAAATGTAAATCCTACATCCTTGCAGCAGAAGTTACTGATCTTTGACCATTCTGGTAATAAGACAAGGATGTTTTATGGTCCAGTTCTCCCTCCTGTCCAGAGTCCAATTGTTACCGCTACTAAATTTGCTCAAAGTCGTAATGTAAATGGGGAGAGACAGGCAAGTAATATGGGCCAAAAATATGTCGCTGGTTACAGTTTACCAGAAGAGTCTGTTAAGGATCATATAGTTATTGAAGAAAGTGAATATCATGAAGACACAGAAGAAATCAATGCATTGCTTTATTCTGATGATGACTTCGATGGAGATGATGATGATGAGGTAACAAGTACAGACCGTTCCCCTCTGGCAACCAAAAGGACTTATGTGATGCAAGAACAATATGGAGATGCAAAAGATAAGGTTGCTAGTTCTGAATCTTCTGATTGTCCTAACAAAAGACTGAAATTGATTGATGATGGCTACAACGGATCGTCCGCACTTGTGGACAATGCTAGTTTGGTAAGACTAAATGAAACCTCTGAGTGTGTTAGTGATGCTGAATCAAAGAATTCTAGTGGCTGGGGACATTCTGTTGAGAAAACTAAGGTAGATAGTTCAATGGTGGATGGTATCAAGTCGAAAAAGTTAAAGATCCGTGAATCATTGCGAGCTCTTGAGAATTTAATTCCTGGTGAAAAAGGAAAAGAACCACTTTCAGTCATTGATGGAGCTATTGAGTACTTGAAATTTTTGATGTCCCAAACTAGTAGTAATCTTGGAGTGAAATATGACTAA 1059 0.406 MVKAGRSLPRPHHVAWQSPYSNFSSVLPNPTLLGVPAYLNSSTCNFPTVGTLPRLAAPAIPSLKSELTNEAKGFLHYPSVETGFKETHTVGAFQNVNPTSLQQKLLIFDHSGNKTRMFYGPVLPPVQSPIVTATKFAQSRNVNGERQASNMGQKYVAGYSLPEESVKDHIVIEESEYHEDTEEINALLYSDDDFDGDDDDEVTSTDRSPLATKRTYVMQEQYGDAKDKVASSESSDCPNKRLKLIDDGYNGSSALVDNASLVRLNETSECVSDAESKNSSGWGHSVEKTKVDSSMVDGIKSKKLKIRESLRALENLIPGEKGKEPLSVIDGAIEYLKFLMSQTSSNLGVKYD* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g4017 352 CDD bHLH_AtbHLH_like 300 342 IPR045239 -
Lja4g4017 352 PANTHER TRANSCRIPTION FACTOR SAC51 8 349 - -
Lja4g4017 352 PANTHER TRANSCRIPTION FACTOR BHLH145 8 349 IPR037546 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g4017 Lja-Chr4 73207880 73208938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g4017 100 349 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09460 34.496 4.56e-19 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g4017 - - gmx:100817942 456.062