Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g4010 ATGGAGGGCGGAAACCGACCTGAAGCAGAACGGTGGCTCTACACCGCCAACAAGCTCCTCAGCGCACGTGACCTGCACGGGGCACGCTCCTTCGCGATCCGCGCCCGTGAATCCGACCCGACGTTTGACGCCTCAGAGCTTCTTCTCACCGTCATCGACACTCTCCTCGCCGGCGAGTCACGGATCAACGACCACCACCGCGACTGGTACGGGATCCTCCAAATCCTCCGCTACACCACCAACATCGACCACATCGCCGCCCAGTACCGCCGTCTCGCACTCCTCCTCGACCCTCATCGGAACCCCTTCGCCTTCGCCGGTCACGCGTTCTCCTTCGTCCATGACGCTTGGTCCGTTCTCTCCAATCCTGCTAAGAAGGCCATGTACGACAGCGAGCTCCGATTGCTCACTTCCCCACCCCCGCCGCAGCTGCAGCCGCATCCACAACCAGCACCACCGCCTCCGCCGCCGCAGCAGCAGCAGATTAACTCAACGCCGCGGAGAAATCCTAGATCCGGTGACAACGCTGCTGACCCGGCTCGGCAGAGCCGAAACCCTAACGAGCCAGCTGAGTCAACTAGGCAGACGCGGACGGCGAGCGTTGAGGCGGAGAAGGAGGATAGCACGAGCTTCTGGACCTCGTGCCCCTACTGTTACGTTCTGTATGAGTATCCGAAGGGGTATGAGGAGTGTACCCTGCGGTGTCAGGGTTGCCGGAGGGGGTTTCATGCGGTGGTGATACGGTCACCGCCGTTGAACGGGAAAGATGCTTCGTTTTGCAGTTGGGGTTTTTTCCCTCTTGGGTTTTCCGGCAATTGCAAAGATGTGAATGGGGTTTCTAACAACTGGAACCCGTTTTCCCCTCTATTTCCCTGTGCCTTGAAAGGGTCCTCAAGGAAGAGGAACTGGGCTTACTATGATGATGAGCAGGCAGCAGCGTTTATCGATCATTCCGATCCTAGTGATGATGATTCTGATGATGGGGACTGGAGGGGTGGTGGACAGAGGGGGAGGAGGAGGTCAAGGGGAACCAGGAGGTATAATGGTAGTTTTAGGAGGGAACCTGTAGATAGACCTAGGAGGAGTGGTGCTGGTCCTGCAGGGAATCAAAATGCAGCCACTGGTGGGGCTGTTGATGCTGCTGGTGTAGGTCCAGGTGCAGGTGCAAGGGGGGAGTCTAGTAAGAAAGCTGCATTGGGTAGTTCCAGGAGGAGGGGTGCAGGGAACTTGGGGAAGTTAGATTTGAATGTGGAGTTCAGCAATGATCCAGAAGAGCCTTCCCGTGGAGTGCGTGACCGGGAAGGGAATGCAACTGGCAATGCTGAGGATAATATTGAAGGGATCGGGTTTTTTGAGGGTCTAGATGAGTTCCTTAATAGCTTACCTATTCTGAATGTTGTAGCAGATGATAAGGTTAAGAGTCATTAG 1428 0.5623 MEGGNRPEAERWLYTANKLLSARDLHGARSFAIRARESDPTFDASELLLTVIDTLLAGESRINDHHRDWYGILQILRYTTNIDHIAAQYRRLALLLDPHRNPFAFAGHAFSFVHDAWSVLSNPAKKAMYDSELRLLTSPPPPQLQPHPQPAPPPPPPQQQQINSTPRRNPRSGDNAADPARQSRNPNEPAESTRQTRTASVEAEKEDSTSFWTSCPYCYVLYEYPKGYEECTLRCQGCRRGFHAVVIRSPPLNGKDASFCSWGFFPLGFSGNCKDVNGVSNNWNPFSPLFPCALKGSSRKRNWAYYDDEQAAAFIDHSDPSDDDSDDGDWRGGGQRGRRRSRGTRRYNGSFRREPVDRPRRSGAGPAGNQNAATGGAVDAAGVGPGAGARGESSKKAALGSSRRRGAGNLGKLDLNVEFSNDPEEPSRGVRDREGNATGNAEDNIEGIGFFEGLDEFLNSLPILNVVADDKVKSH* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g4010 475 MobiDBLite consensus disorder prediction 418 439 - -
Lja4g4010 475 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 1 475 - -
Lja4g4010 475 SUPERFAMILY Chaperone J-domain 64 134 IPR036869 -
Lja4g4010 475 Gene3D DnaJ domain 62 137 IPR036869 -
Lja4g4010 475 SMART dnaj_3 67 125 IPR001623 -
Lja4g4010 475 MobiDBLite consensus disorder prediction 162 197 - -
Lja4g4010 475 MobiDBLite consensus disorder prediction 135 205 - -
Lja4g4010 475 ProSiteProfiles dnaJ domain profile. 68 133 IPR001623 -
Lja4g4010 475 ProSitePatterns Nt-dnaJ domain signature. 110 129 IPR018253 -
Lja4g4010 475 CDD DnaJ 68 122 IPR001623 -
Lja4g4010 475 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 475 - -
Lja4g4010 475 MobiDBLite consensus disorder prediction 315 444 - -
Lja4g4010 475 MobiDBLite consensus disorder prediction 139 161 - -
Lja4g4010 475 Pfam DnaJ domain 68 130 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g4010 Lja-Chr4 73163897 73165789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g4010 8 474 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 42.626 1.29e-107 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g4010 - - cam:101509006 642.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g4010 4 73163897 73165789 Lja6g3246 6 60828372 60830059 PCT