Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3991 ATGGAGTGCTACAAGGAAGAAATTTTTGGCCCTGTTCTTCTTTTCATGGAGGCTGATAGCTTGGAAGAGGCCATAGACATTATCAACAAGAACCAGTACGGAAATGGTGCTTCTATATTTACTACATCTGGTGTTGCTGCAAGGAAGTTTCAGACTGATATTGAGGCTGGGCAGATTGGCATCAATGTTCCAATTCCAGTTCCTTTGCCCTTTTTCTCATTCACTGGAAACAAGGCATCGTTTGCTGGCGATCTCAATTTCTATGGCAAAGCAGGGGTTAACTTTTATACACAGATGAAAACAATAACCCAGAAATGGAAGGATTCAGAGGGTGGTAGCAAGATTAACTTGGCCATGCCAACCTCTCAAAAGTCTTGA 378 0.4233 MECYKEEIFGPVLLFMEADSLEEAIDIINKNQYGNGASIFTTSGVAARKFQTDIEAGQIGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVNFYTQMKTITQKWKDSEGGSKINLAMPTSQKS* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3991 125 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 1 125 IPR010061 GO:0004491
Lja4g3991 125 SUPERFAMILY ALDH-like 1 107 IPR016161 GO:0016491
Lja4g3991 125 PANTHER METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE 1 125 - -
Lja4g3991 125 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 1 110 IPR016163 GO:0016620
Lja4g3991 125 Pfam Aldehyde dehydrogenase family 1 102 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3991 Lja-Chr4 73010100 73011612 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3991 1 90 Aldehyde Dehydrogenase Gene Family AT2G14170 86.667 3.35e-51 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3991 K00140 - gmx:100791508 240.35