Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3986 ATGGCAGCACCTCCTTGCCATCAGAAAACTCATCTACTTTTTTCTTTTCACATAACATTAACACTCTTGCTTGTTGAAATATCTAGTGCAGCTCCATTGTCTTTCAACTATCAGCAACTCAGCAACACTGGAAATTCCTTCAACTTTTTAGGAGATGTCTATAAGGACAAACAGGCCCTCCAACTCACCAGGTATGAGAAAGATAGTCTTGGCCGAGTCATATACTCCAAACAGCTCCATCTTTGGGATACAAACTCAAGCAAGATCACAGATTTCACTACCAGTTTCTCCTTCACCATGAACACACCCAACAAGACCCATCATGGAGATGGCATCACTTTCTATCTTGCACAGCCCAATTTTCCTTTACCAGTTCCTAGAGATGGCAGTGGAATGGGTCTCGCGAGCCGTGATCAACTGGCTAACCCAAATTACACTAAAGAACATCCATTTGTAGCAGTTGAATTTGATACCTTTGCCAATGACTGGGATCCTAAATATCACCATGTGGGTATTGATGTTAATTCTATCAGCACTGATTACTCAACACAATGGTTCACTAGCATGGATGAGAGAGGATATGAAGCTGTTGTCAGTTTCAATTCTGATTCAAACAATTTAAGTGTTACCTTCACCGACTACAAGGATAACATCACAATTAAACAGAACTTGTCCTGTGTGGTGAATCTGAGAGAGGCTCTACCTGATTGGGTTGAATTTGGCTTTACTTCAGCAACAGGGTTCTTTTTTGAGGAACATACTCTTGAGTCGTGGTCCTTCAACTCTAGTTTAGACTTCGAAGCGCGCAAGGACGGAAGCAAAACAGGACTGGTGGTAGGACTCAGCGTTGGTGGTGCGGGTGTTTTAATTTGTGTTTTGGTGCTGGCTTGCTTTGTGACATGGAAGCTGAGGAAGAGAGGCGTGGAGGGTGACTCTCGTTTTGATCTCGCCATGGATAGCGATTTCGAAAGAAGCTCTTTTCCCAGGAAGTTTTCCTATGAAGAGCTTGCTAGAGCAACTAGCAACTTTGCAAAGGAACACAAAATTGGAGAGGGAGGTTTTGGTGGAGTATATAAAGGATTTATCAGAAACTTGAACACCAATGTCGCCATTAAGAAGGTGTCTCCGGGTTCGAAACAAGGGGTGAAGGAGTATGCATCTGAGGTGAAGATCATTAGTCAACTGAGGCATAAGAACTTGGTTCAGCTCTTTGGGTGGTGTCACCAGAAGAATGAACTTCTACTGGTTTATGAGTTCATGGAAAATGGAAGTTTAGATTATTATCTGTTCAAAGGTAAAGGCCTGCTAACATGGGCAGTGAGATATAACATTGCTAGAGGCCTGGCCTCAGCTTTATTATACCTGCATGAAGAGTGGGAGCAATGTGTGCTTCATAGAGATATAAAATCAAGCAATGTCATGCTGGATTCCAATTTCAACGTGAAGCTTGGAGATTTCGGGTTAGCCAGACTAATGGACCATGGGACAGAGTCAAAGACAACTGGTTTAGCAGGAACATATGGATATTTGTCTCCTGAAGCTGCTACCAGAGGCAAAGCTAGTAGAGAGTCTGATGTGTACAGTTTTGGGGTTGTTGCTTTGGAGATAGCATGTGGTAGAAAGGCAATTGAACCCAATTTGAGTGAAGAACACATCTACTTGGTGGATTGGGTTTTGAAGCTCTATGGTAAAGGTGATCTCCTTAAAGCAGCTGATTCAAAATTGTATGGAGATTTTGATGAGAAGGAAGTAGAGAGATTGATGATAGTTGGACTTTGGTGCACTCATGAAGATTACCTTCAGAGGCCTGTGATTAGGCAAGTTGCTCATGTGCTTACTTCTGAAGTTCCTTTGCCTATTCTCCCATCATCACAGGTTTCTGCTCTTACTCAAAGTTCATCTTTGAGGCATGTGGCTTCTAAATCCCCTGCTTTTGAGAATAACCAATCTGGGACCTCAACTTCAAGCAATAGTTCAATCACTCGGTCCTCACAATCCAGCACAGCTTTTGAAGTCATATCTCCATCAGCTGCACTCTTACGTACATACTAA 2052 0.4259 MAAPPCHQKTHLLFSFHITLTLLLVEISSAAPLSFNYQQLSNTGNSFNFLGDVYKDKQALQLTRYEKDSLGRVIYSKQLHLWDTNSSKITDFTTSFSFTMNTPNKTHHGDGITFYLAQPNFPLPVPRDGSGMGLASRDQLANPNYTKEHPFVAVEFDTFANDWDPKYHHVGIDVNSISTDYSTQWFTSMDERGYEAVVSFNSDSNNLSVTFTDYKDNITIKQNLSCVVNLREALPDWVEFGFTSATGFFFEEHTLESWSFNSSLDFEARKDGSKTGLVVGLSVGGAGVLICVLVLACFVTWKLRKRGVEGDSRFDLAMDSDFERSSFPRKFSYEELARATSNFAKEHKIGEGGFGGVYKGFIRNLNTNVAIKKVSPGSKQGVKEYASEVKIISQLRHKNLVQLFGWCHQKNELLLVYEFMENGSLDYYLFKGKGLLTWAVRYNIARGLASALLYLHEEWEQCVLHRDIKSSNVMLDSNFNVKLGDFGLARLMDHGTESKTTGLAGTYGYLSPEAATRGKASRESDVYSFGVVALEIACGRKAIEPNLSEEHIYLVDWVLKLYGKGDLLKAADSKLYGDFDEKEVERLMIVGLWCTHEDYLQRPVIRQVAHVLTSEVPLPILPSSQVSALTQSSSLRHVASKSPAFENNQSGTSTSSNSSITRSSQSSTAFEVISPSAALLRTY* 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3986 683 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Lja4g3986 683 SMART serkin_6 343 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g3986 683 SUPERFAMILY Protein kinase-like (PK-like) 326 634 IPR011009 -
Lja4g3986 683 CDD lectin_legume_LecRK_Arcelin_ConA 33 264 IPR001220 GO:0030246
Lja4g3986 683 SUPERFAMILY Concanavalin A-like lectins/glucanases 32 264 IPR013320 -
Lja4g3986 683 CDD STKc_IRAK 349 613 - -
Lja4g3986 683 Gene3D Transferase(Phosphotransferase) domain 1 420 631 - -
Lja4g3986 683 ProSiteProfiles Protein kinase domain profile. 343 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g3986 683 MobiDBLite consensus disorder prediction 640 662 - -
Lja4g3986 683 PANTHER - 19 681 - -
Lja4g3986 683 Pfam Legume lectin domain 33 271 IPR001220 GO:0030246
Lja4g3986 683 PANTHER LECTIN RECEPTOR KINASE 19 681 - -
Lja4g3986 683 Gene3D Phosphorylase Kinase; domain 1 328 419 - -
Lja4g3986 683 ProSitePatterns Protein kinases ATP-binding region signature. 349 373 IPR017441 GO:0005524
Lja4g3986 683 Gene3D - 31 277 - -
Lja4g3986 683 ProSitePatterns Legume lectins beta-chain signature. 152 158 IPR019825 -
Lja4g3986 683 ProSitePatterns Legume lectins alpha-chain signature. 234 243 IPR000985 -
Lja4g3986 683 Pfam Protein kinase domain 344 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3986 Lja-Chr4 72935631 72938048 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3986 12 623 Receptor kinase-like Gene Family AT5G10530 45.527 8.24e-173 507
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lja4g3986 Pkinase 5.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3986 - - cam:101491058 1003.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3986 4 72935631 72938048 Lja4g3986 4 72935631 72938048 ECH