Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3982 ATGGCAGAATGGCATTTTGGTCTCTATTCAAAAACTCCTCCTATGGTCTCTTATGCAAGAAGGGTAACCATTTTGTTCTTCCCCTTGCTGATAGTCATAGTCAGGGTCCCTTTTACAGTTCCTCAACCTGTGTCTTATGATTACCCAAATTTTAATCATACTTATGTGGAACAGCCAGTGTTGGAAGGTGAAGCTTCTATTGTAGATTCTGACTCTGTGATCCGAATCACTGGGAAACCACATAATGGTTCAGGTGTTGGTAGAGTCACAATTCCCAAACATGTTCAACTTTGGGACAAGATCTCTAATGAACTGAATGACTTCACCACCAAGTTTTCCTTTGTTATCTTTTCAAATGAAACCTATTTTGGAGATGGTTTGGCATTTTTTCTAGCAAGCCCTGATCTCCCAAAGGCACTTGACATAGGTGGTGGAGGAGGCTTTGGTATTTTGCCTGAAAATGAAACTGTCTCAACTGAGTATTCATTTGTGGCAGTGGAGTTCGACACTCACACAAATACATTGGATCCAGATGGGACTCATGTGGGAGTGGATATCAATTCTGTGAGATCTAACAGATATTTACAATGGATGGCAGATATTTCACAAAGGATAGTTTATAATTGTACAATTGAGTACAGTTCAAGGGAAAATCATCTAAACGTTTCTTTCACTGGGCACAGCTTGAATGAAGGGATGGTACACCAGCACTTTTCATACCACATTGATCTGAGGGAGAATTTACCTGAGTATGTTATTGTTGGCATAACAGCTTCAACAGGATTGAACAGAGAGGAACATACTTTGCTGTCATGGTCATTTAGCACAAGCCCTCCTAGTAATGATGATGATCCTAAGAAGGGAAGCAAGTTCATCAACAACAGAAAATTGTTGGAGGGTATAGGAATTGGTGTAGGTTTGGCTTTGAGTTTAACAGGATTGATTCTCACTGTGCTATGGAATGTGAATAAAGAAAAAGAAGAAGAATCACCCACTTCAGACACTATCTCTGACCTGAGGATGGATGATGAGTTCATAATGAGTATTGGACCTAAGAAGATTAATTACTATGAATTGGCAACTGCAACAAACAACTTTGAAGAGACACAGAAGCTTGGACAAGGTGGTTTTGGTGGTGTTTACAAAGGCTATTTTAGATGCTCAAACTCCTTTGCTGCTATAAAGAAGATATCAGCAGATTCAAAACAAGGCATAAAGCAATACGCGGCAGAAGTGAAGATCATAAGCCAACTGAGGCATAGGAATTTGGTGAAACTCACAGGTTGGTGCCATAAGAGGACTGAATTAATCCTGATATACGAGTACATGCCGAACGGAAGCTTAGATTCTCATCTTTTTCGCGGAAAAAGCGTCTTGTCGTGGGAGGAAGAATGGGAGAAATGTGTGATTCACAGGGACATTAAATCAAGCAACATCATGTTGGACTCAAACTTCAATGCTAAGCTTGGGGATTTTGGACTAGCTACCCTAGTTGATCATGAGAAAGGGGCACAAACCACTGATGTGGCTGGGACAATGGGTTACCTTGACCCTGAATACATAAACACTGGGAAAGCTGGTAAGGAATCTGACATTTTCAGTTTTGGGGTTGTTTTGTTGGAGGTAGCCACTGGAAGAAAAGCAAGTCACCACCATGACATGGAGGGTCAAGTTTCACTAGTTGAGTGGGTTTGGGAGCTATATGAATTCAGAAATCTCATGGCAGCAGCTGACCCTAACTTATGTGGGGCTTTTAATGTGCAGCAAATGGAGCTTGTGCTGGTTGTGGGGCTTTGGTGTGCTAATCCAGATTTCAAATCAAGGCCATGTATAAGGAAAGTGATTAAAGTGCTAAACTTTGAAGCTTCATTGCCAATTTTACCACAGAAAATGCCTCACCTTGCTCTTCGCTCTCCAACAACAAATGAGCATTTTATCTCAGTTTCATCTTCCTTTTCTTCAGTTTCATTAGAATTAGACAGAAATTAG 1989 0.4072 MAEWHFGLYSKTPPMVSYARRVTILFFPLLIVIVRVPFTVPQPVSYDYPNFNHTYVEQPVLEGEASIVDSDSVIRITGKPHNGSGVGRVTIPKHVQLWDKISNELNDFTTKFSFVIFSNETYFGDGLAFFLASPDLPKALDIGGGGGFGILPENETVSTEYSFVAVEFDTHTNTLDPDGTHVGVDINSVRSNRYLQWMADISQRIVYNCTIEYSSRENHLNVSFTGHSLNEGMVHQHFSYHIDLRENLPEYVIVGITASTGLNREEHTLLSWSFSTSPPSNDDDPKKGSKFINNRKLLEGIGIGVGLALSLTGLILTVLWNVNKEKEEESPTSDTISDLRMDDEFIMSIGPKKINYYELATATNNFEETQKLGQGGFGGVYKGYFRCSNSFAAIKKISADSKQGIKQYAAEVKIISQLRHRNLVKLTGWCHKRTELILIYEYMPNGSLDSHLFRGKSVLSWEEEWEKCVIHRDIKSSNIMLDSNFNAKLGDFGLATLVDHEKGAQTTDVAGTMGYLDPEYINTGKAGKESDIFSFGVVLLEVATGRKASHHHDMEGQVSLVEWVWELYEFRNLMAAADPNLCGAFNVQQMELVLVVGLWCANPDFKSRPCIRKVIKVLNFEASLPILPQKMPHLALRSPTTNEHFISVSSSFSSVSLELDRN* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3982 662 SMART serkin_6 366 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g3982 662 Gene3D Phosphorylase Kinase; domain 1 351 442 - -
Lja4g3982 662 Pfam Legume lectin domain 45 287 IPR001220 GO:0030246
Lja4g3982 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Lja4g3982 662 ProSiteProfiles Protein kinase domain profile. 366 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g3982 662 PANTHER - 30 654 - -
Lja4g3982 662 Gene3D - 42 279 - -
Lja4g3982 662 PANTHER LECTIN RECEPTOR KINASE 30 654 - -
Lja4g3982 662 SUPERFAMILY Concanavalin A-like lectins/glucanases 44 286 IPR013320 -
Lja4g3982 662 ProSitePatterns Legume lectins beta-chain signature. 164 170 IPR019825 -
Lja4g3982 662 Pfam Protein kinase domain 366 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g3982 662 CDD lectin_legume_LecRK_Arcelin_ConA 44 277 IPR001220 GO:0030246
Lja4g3982 662 SUPERFAMILY Protein kinase-like (PK-like) 351 645 IPR011009 -
Lja4g3982 662 Gene3D Transferase(Phosphotransferase) domain 1 443 637 - -
Lja4g3982 662 ProSitePatterns Protein kinases ATP-binding region signature. 372 396 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3982 Lja-Chr4 72919395 72921437 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3982 23 632 Receptor kinase-like Gene Family AT5G10530 40.909 1.23e-147 441
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lja4g3982 Pkinase 1.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3982 - - lja:Lj4g3v0408370.1 910.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3982 4 72919395 72921437 Lja4g3982 4 72919395 72921437 ECH