Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3957 ATGGAAATGAAATTAATTTCCAGAGAAACAATCACACCATCCACACCCACTCCTCCTCACCTCAGAATTTACCCTCTTTCTTTCATAGATCACGTCGTGCTCAATAATTATATGCCATCACTTTTCTTTTACCAGCCAAACGCCGTGGGACGACAATGTGAGCCAAAAACCAAAATATGTGAGCTCAAGAAATCATTATCTCAAGTTCTATCCAGATACTACCCCTTAGCAGGCAGGTTCAGAGATCAGCTTTCCATTGATTGCAGTGACCAAGGTGTGCCATTTCTAGTCACAAGGATCACAGGTACAAAGCTATCAACCATCCTCCAAAACCCCACTGAAACGTTGTTGAACCCTTTGTCCCCTGATGAGTTGCACTGGAAGCCTATGAATCCAGGTGGAAGTATAGTTGCCACTCAAATTAACTGTTTTGCATGCGGAGGCATGGCGATCAGTGTGTGCATGAGTCACAAAGTAGGCGATGCTACCACTCTTTTCAATTTTGTCAACGATTGGGCCACCATGAATATAGAAAAAGAAAAAGGAGAGTTGTTACTACCCTACCCTTTTCTTGATGGTGGAGTCTCAGTGTTCCCACATAGAGACTTGCCTGTTTTCCCTGAAATGATGTGTTTGAAACTGAAAATGACAGTGTGCAGAAGGTTCGTGTTTCCAGGCTCAAGAATCAAGTCCCTCAAGGCCATGGTATCTTCCCACGGGGTGCAAAATTCCACACGCGTTGACGTTGTCACTGCTTGGGTTCACAAGTGTGTAGTTTCTGCACTGGGGTTAACTTTAGATAGAGCATCACTATGCATAATTGCTAACTTTCGCAAAAAAATGGTTCCTCCATTGCCTGACAAGTGCCTAGGGAACATGGCTTGGATGTATTATGTGTTCAACCCAGTCGTGGACAAGAGGGAAATGGAACTATCCAAGTTGGTAAGCAAAATAAAAAAAGGGTTATCTGAGTTTTTAGACGTGTATCCAAAGAAATTTGGAGGGAACAATAAGGACTTATCATTTATCTCTGAGTTCATGAAACAAGCCACTTCAGCTCTTGTGCCCCCCAAAACTTCATCTTCGGAGCTTTGTGGTTCTGGTCATAAAGAGAATGAAATGTTGTTTACATATTCTAGTTTGTGCAGACTCCCAATGTATGAGGCAGATTTTGGGTGGGGCAAACCAATTTGGGTGACAATTACTGATTCTCCCATGACGAATGTCGTATATTTTATGCCTACAAGATATGGGGATGGAGTTGAAGCGCTTGTGCATATGGATGAGAAAGACATGACCAAGTTTGAGCGTAATTTGGAGCTCCTTCAATACGCTTCTCTAAATCCAAACCGATGGCCAGGTTTGAGCATAGTGGAGAGTTCCTTCAATTCGCGTCTCTGA 1401 0.4297 MEMKLISRETITPSTPTPPHLRIYPLSFIDHVVLNNYMPSLFFYQPNAVGRQCEPKTKICELKKSLSQVLSRYYPLAGRFRDQLSIDCSDQGVPFLVTRITGTKLSTILQNPTETLLNPLSPDELHWKPMNPGGSIVATQINCFACGGMAISVCMSHKVGDATTLFNFVNDWATMNIEKEKGELLLPYPFLDGGVSVFPHRDLPVFPEMMCLKLKMTVCRRFVFPGSRIKSLKAMVSSHGVQNSTRVDVVTAWVHKCVVSALGLTLDRASLCIIANFRKKMVPPLPDKCLGNMAWMYYVFNPVVDKREMELSKLVSKIKKGLSEFLDVYPKKFGGNNKDLSFISEFMKQATSALVPPKTSSSELCGSGHKENEMLFTYSSLCRLPMYEADFGWGKPIWVTITDSPMTNVVYFMPTRYGDGVEALVHMDEKDMTKFERNLELLQYASLNPNRWPGLSIVESSFNSRL* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3957 466 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 5 450 - -
Lja4g3957 466 PANTHER F21J9.9 5 450 - -
Lja4g3957 466 Pfam Transferase family 3 441 - -
Lja4g3957 466 Gene3D - 1 206 IPR023213 -
Lja4g3957 466 Gene3D - 215 446 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3957 Lja-Chr4 72571531 72572985 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3957 1 439 Monolignol Biosynthesis Gene Families AT5G48930 24.406 2.02e-24 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3957 - - lja:Lj4g3v2512860.1 679.863