Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3955 ATGGCTCCTCAAATTCATGACTTGTTAGCCCTTTTCACTTTTTTCTTATCCATGATTCTTGCACTCATGATGATGAGGAAGAATCTAAGAAAACCTGACTCAATTCCAAATATACCACCAGGGCCATGGAAGCTACCAATAATAGGAAGCATACCCCATCTCATTGGTTCTCCACCACACAGAAAATTAAGAAAATTGTCCAAAAAATATGGCCCCTTGATGCACCTTCAACTTGGAGAGGTCTTCTTCATCATTGTTTCATCAGCAGAGTATGCTAAGGAAGTCATGAAAACCCATGATGTTACCTTTGCATCAAGGCCTTATACTCTAGCCTCGGATATAGTGTTTTATGGTTCAACAGACATAGCCTTTTCACCTTATGGTGATTACTGGAGACAGCTTAGGAAGATTTGCAATGTAGAGCTTTTAAGCATGAAACGTGTCCAATCTTTGTGGCCAGTCAGAGTGGGAGAGGTGACTAACTTCATCAAACACATTGCTTCAGAAGAAGGATCAGTCATCAATCTTTCTCAAGCAATTGTTTCATTGTTATTCACAATCACTTCAAAGACTGCATTTGGCAAGACATATGAGGAACAAGATGAGTTCATATCAGTGGTAAAACAACTTGCAAAGCTCTGTGGAGGTTTCTACATAGGAGACTTGTTTCCTTCAGCTAAATGGCTTCATTACATTTCTGGGATGAGGCCTAAGCTTGAAAAGTTGCGCCACATAGTAGACAGGATTATGGAGAATATCATCAATGACCATAAAGAGGCAAGGTTAAGATCTAAACAAGCATTTCGTGAAGCAGAGGGAGATCTGATTGATGTTCTCTTAGAGTTTGAGGATGATTTTCGCTTACCTTCGACGACTATCAAAGCTATAATCTTCGATGTATTTATTGCTGGGAGCGAGTCTGCAGCAACTACTGTTAATTGGGCAATGACTGAGATGTTGAAGGATCCAAGAGTATTGAAGAAAGCACAAATTGAAGTGAGAGAGGTGTTTGACAGGAGAGGAAAGATTGATGAAAGTGCCATTGAGGAGCTCAAATACTTAAAAGCAATCATCAAAGAGGTCCTCAGGTTACATCCTCCTGGTCCTCTTCTTATTCCAAGGGAATGTGAAGAAGCATGTGAGATTAATGGATTTAATATACCTGTTAAAAGCAGAGTCATTGTCAATGCTTGGGCAATTGGAAGGGATCCAAAATATTGGAATGAACCAAATAGGTTTTATCCTGAAAGGTTTATTGATAATTCTATTGATTACAAAGGAACTGATTTTAAGTATATCCCATTTGGAGCTGGAAGGAGAATTTGCCCTGGCATGAACTATGGTATGGCAAATGTTGAGGAGGTCCTTGCATTCTTACTATATCATTTTGATTGGAGACTACCCAATGGAATGAAAAATGAGGACTTGGACTTGACGGAGGAATTTGGAATTACTATAATTAAAAAATATGATCTATACTTGATTCCCACTGTTGTCCATCCTTTGCCTGCAGCTTAG 1518 0.3913 MAPQIHDLLALFTFFLSMILALMMMRKNLRKPDSIPNIPPGPWKLPIIGSIPHLIGSPPHRKLRKLSKKYGPLMHLQLGEVFFIIVSSAEYAKEVMKTHDVTFASRPYTLASDIVFYGSTDIAFSPYGDYWRQLRKICNVELLSMKRVQSLWPVRVGEVTNFIKHIASEEGSVINLSQAIVSLLFTITSKTAFGKTYEEQDEFISVVKQLAKLCGGFYIGDLFPSAKWLHYISGMRPKLEKLRHIVDRIMENIINDHKEARLRSKQAFREAEGDLIDVLLEFEDDFRLPSTTIKAIIFDVFIAGSESAATTVNWAMTEMLKDPRVLKKAQIEVREVFDRRGKIDESAIEELKYLKAIIKEVLRLHPPGPLLIPRECEEACEINGFNIPVKSRVIVNAWAIGRDPKYWNEPNRFYPERFIDNSIDYKGTDFKYIPFGAGRRICPGMNYGMANVEEVLAFLLYHFDWRLPNGMKNEDLDLTEEFGITIIKKYDLYLIPTVVHPLPAA* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3955 505 Gene3D Cytochrome P450 33 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3955 505 SUPERFAMILY Cytochrome P450 39 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3955 505 PANTHER CYTOCHROME P450 71B11-RELATED 12 501 - -
Lja4g3955 505 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3955 505 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3955 505 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3955 505 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3955 505 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3955 505 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3955 505 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3955 505 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3955 505 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3955 505 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 12 501 - -
Lja4g3955 505 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3955 505 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3955 505 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3955 505 Pfam Cytochrome P450 39 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3955 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3955 Lja-Chr4 72558551 72560535 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3955 15 496 Cytochrome P450 AT3G26310 41.414 1.78e-131 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3955 - - mtr:MTR_3g058060 713.375