Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3951 ATGGCATCATCTCAACCACCGCCATCTTGGAGAGTTGTTCAAGCTTGCAGTGTGGAACCCCTGCAGGGAGGAGCAATCCCTTCCTCCACCATTCCAACCTCTCTGCCACTCACCTTCTTCGACCTTTTCTGGCTAAGGTTTCCACCTGTTGAGCGTCTCTTCTTCTATCACTTTTCACACTCAACCTCTTCTTTCTTTGACTCTGTTCTTCCCAATCTCAAACACTCCCTTTCACTCACACTCCAACACTTCCTCCCTCTTGCGGGTAACATCATCTGGGATCAGCAGCCCCATGATAATGATCCCTCAAAATCCAAACCAATCATCATCAGCTATGTCCCTGGTGATGCTGTTTCCTTCACTGTAGCTGAATCCAATGCTGATTTCAGCTACCTATGTTCTGATCTCTGCCAAGCTTCGCAAGGACACCACCTCATACCCCACTTGACCACTTCCCATGAAAAAGCCTCTGTTCTAGCACTGCAAGTCACTCTATTTCCAAATTCTGGCTTCTGCATTGGACTAACCACACACCATGCAGCTTTTGATGGAAAGTCTTCAACTTCATTTGTGAAATCATGGGCCTACACTTGCTCTAACCTTGAAAAACAATCATCATCATCATCTTCTTCTTCTTTATCATCATTTTTACCTGAAGATCTAACACCTTTCTTTGACAGATTGGTGATACAAGAGAAAGACCATACAGGAATCGGCGAGGCGTACTTAGACGCATGGTTGAAGAAAGATGGACCAAATAATCGAAGCCTCAAGGTGTGGCAGTCAATAACAACAACAACACAAACCAATGATAAGGTTAAACTTAAAGGTGTATTTGAATTGACCTCCTCAGATATCCAGAAGCTTAAGCAATATGCACTTTCCAAGCTGAAAATGAAGGATGATCGGTTATCAACTTTTGCTGTCTCTTGTGCTTATGTGTTGGCATGTGCTGTCAAAGCAGAACAACCAAAGGGAGATACTGTAATGTTTGCATTTAGTGTAGATTGTAGATCCAGATTATTGGACCCTCCAATTGTGTCCCCCACTTATTTTGGAAATTGCATTACTGGTCAAAGGTTTGAAGCTAAGATCAAGAGCTTGCAAGAAAAAGAAGGATTCATTAGAGCTTTGGAGAAGATGAATGAAGCTTTGAGTAGGGTGAAGTATGATGGAGTGCTGAGTGGAGCAAAAGATAGGGCAGCTTCAATGTTGCAGAAGCTCCCGCAAGGAAGGGTATACTCCATTGCCGGATCGCCGCGGTTCGAGGTTTATGGTATTGATTTTGGATGGGGAAGACCAAAGAAGGTGGATATTACTTCCATAGACAGAACAGGAGCATTTTCACTTTCAGAAAGTAAGAATAATAATGGAGGGATTGAGATTGGATTGGTGTTGAACAAACATGATATGGAAGCTTTTTCTGCCAGTTTTATCCAACAACTTGAATCCTTCTAA 1458 0.4287 MASSQPPPSWRVVQACSVEPLQGGAIPSSTIPTSLPLTFFDLFWLRFPPVERLFFYHFSHSTSSFFDSVLPNLKHSLSLTLQHFLPLAGNIIWDQQPHDNDPSKSKPIIISYVPGDAVSFTVAESNADFSYLCSDLCQASQGHHLIPHLTTSHEKASVLALQVTLFPNSGFCIGLTTHHAAFDGKSSTSFVKSWAYTCSNLEKQSSSSSSSSLSSFLPEDLTPFFDRLVIQEKDHTGIGEAYLDAWLKKDGPNNRSLKVWQSITTTTQTNDKVKLKGVFELTSSDIQKLKQYALSKLKMKDDRLSTFAVSCAYVLACAVKAEQPKGDTVMFAFSVDCRSRLLDPPIVSPTYFGNCITGQRFEAKIKSLQEKEGFIRALEKMNEALSRVKYDGVLSGAKDRAASMLQKLPQGRVYSIAGSPRFEVYGIDFGWGRPKKVDITSIDRTGAFSLSESKNNNGGIEIGLVLNKHDMEAFSASFIQQLESF* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3951 485 PANTHER - 8 484 - -
Lja4g3951 485 SUPERFAMILY CoA-dependent acyltransferases 302 484 - -
Lja4g3951 485 Pfam Transferase family 32 477 - -
Lja4g3951 485 Gene3D - 273 485 IPR023213 -
Lja4g3951 485 PANTHER MALONYL-COA:ISOFLAVONE 7-O-GLUCOSIDE MALONYLTRANSFERASE 8 484 - -
Lja4g3951 485 Gene3D - 7 248 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3951 Lja-Chr4 72510778 72512235 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3951 53 474 Monolignol Biosynthesis Gene Families AT5G48930 25.688 1.16e-15 77.0