Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3949 ATGGCTCCTCAAATTCATGATTTGTTAGCCCTTTTCTCTTTCTTCCTATCCATGATTGTTGCACTCATGATATTAAGGAAGAATCTTAAAAAACCTGACTCAATTCCTAATATACCACCAGGGCCATGGAAACTACCAATAATAGGAAGCATACCCCATCTCGTTGGTTCTCCACCACACAGAAAATTAAGAGATTTGGCCAAAAAATATGGCCCCTTGATGCACCTTCAACTTGGAGAGGTCATCTTCATCATTGTTTCCTCAGCAGAGTATGCTAAGGAAGTCATGAAAACCCATGATGTCACATTTGCATCCAGGCCTCGTTCTCTTTTCACAGATATAGTGTTTTATGGTTCCACAGACATAGGCTTTTCACCTTATGGTGATTACTGGAGACAAGTTCGAAAGATTTGCAATGTAGAGCTTCTAAGTATGAAACGTGTCCAGTCTTTATGGCCAATCAGGGAGGAAGAGGTGAAAAATCTAATCCAACGCATTGCATCAGAAGAAGGGTCCGTCGTCAATCTTTCTCAAGCTATTGATTCATTGATTTTCACAATCACTTCAAGGTCTGCTTTTGGCAAGAGATACATGGAGCAAGAAGAGTTCATATCATGCGTAAGAGAAGTTATGAAGCTAGCTGGAGGTTTCAACATAGCAGACTTGTTTCCTTCAGCTAAGTGGCTTGAGAACCTCACAAGGATGAGGTCTAAGTTTGAATATTTGCACCAAAAGATGGATAGAATATTGGAGACTATCATCGATGACCATAAGGCAAATTCAAGAACCAAAGAAGGCCAAGTTGAAGGAGGAGAGGAAGATCTGATTGATGTTCTCTTAAAATATGAGAATAGTAGCACTGACCAGGATTTTCACTTAACTATTAGAAACATCAAAGCAATACTCTTTGATATCTTCATTGCTGGAAGTGAGACATCAGCAACTACCATTAACTGGACAATGGCTGAGATGATGAAAGATCCTATACTACTGAAGAAAGCACAAGATGAAGTGAGAGAGATATTCCAAAGAAGAGGAAAGGTTGATGAAACTTGCATTTATGAGCTCAAATACTTGAAAGCATTCATCAATGAGGTCCTCAGATTACACCCTCCTGGTCCTCTTGTATTCCGGGAATGTAGACAAGCTTGTGAGATTAATGGTTATCATATACCTGCAAAAAGCACGGTCTTAGTCAATACTTTTGCAATTGGAACAGATTCAAAATATTGGGCTGAACCAGAGAGGTTTTGTCCTGAAAGGTTTATTGATAGCTCTATTGACTACAAAGGAACTAATTTTGAGCATCTCCCATTTGGTGCTGGAAGGAGAATTTGCCCAGGGATAAATTATGGCATGGCAAATGTTGAATTGGTTCTTGCTTTGTTGTTGTATCACTTTGATTGGACACTTCCCAAGGGAATTAAAAATGAGGACTTAGACTTGACTGAGGAATTTGGAGTTACTGTGTCAAAGAAAGACGATTTATGTTTGATTCCCTCAATTTCGCATCCATTGCCTTCAACTTAG 1530 0.3928 MAPQIHDLLALFSFFLSMIVALMILRKNLKKPDSIPNIPPGPWKLPIIGSIPHLVGSPPHRKLRDLAKKYGPLMHLQLGEVIFIIVSSAEYAKEVMKTHDVTFASRPRSLFTDIVFYGSTDIGFSPYGDYWRQVRKICNVELLSMKRVQSLWPIREEEVKNLIQRIASEEGSVVNLSQAIDSLIFTITSRSAFGKRYMEQEEFISCVREVMKLAGGFNIADLFPSAKWLENLTRMRSKFEYLHQKMDRILETIIDDHKANSRTKEGQVEGGEEDLIDVLLKYENSSTDQDFHLTIRNIKAILFDIFIAGSETSATTINWTMAEMMKDPILLKKAQDEVREIFQRRGKVDETCIYELKYLKAFINEVLRLHPPGPLVFRECRQACEINGYHIPAKSTVLVNTFAIGTDSKYWAEPERFCPERFIDSSIDYKGTNFEHLPFGAGRRICPGINYGMANVELVLALLLYHFDWTLPKGIKNEDLDLTEEFGVTVSKKDDLCLIPSISHPLPST* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3949 509 PANTHER CYTOCHROME P450 71B11-RELATED 9 504 - -
Lja4g3949 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Lja4g3949 509 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3949 509 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3949 509 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3949 509 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3949 509 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3949 509 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3949 509 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3949 509 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3949 509 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3949 509 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 9 504 - -
Lja4g3949 509 Gene3D Cytochrome P450 33 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3949 509 Pfam Cytochrome P450 39 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3949 509 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3949 509 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3949 509 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3949 509 SUPERFAMILY Cytochrome P450 39 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3949 Lja-Chr4 72481430 72483427 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3949 14 501 Cytochrome P450 AT3G26300 41.283 1.69e-124 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3949 - - mtr:MTR_3g058060 694.886