Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3948 ATGAAAGGGGATATTTTCTTTATGACCTTGTTGATTTATTTGCTCAGTATCTCAATTACAAGTTATTGTACCGATTCAGATATCTTCTGTTTAAGATCCCTTAATTCCTTGGAAGACCCGAATAATTACATAACCTCAAGCTGGAACTTCAACAACACCGAAGGTTTCATATGTAGATTCAATGGGGTTGATTGCTGGCCTTCTTATGAGAACAGTGTACTCAATCTCAAGCTATCCAATATGGGACTGAAGGGTCAGTTTCCTCGGGGCCTTGAGAATTGCTCATCATTGACAGGTTTAGACCTTTCTGGCAATGAACTCTCTGGACCCATCCCATCTGACATTAATGAATTACTTCCATTTGTTACAAGCATGGATCTCTCTGGTAACAAATTCAGTGGAGAAATTCCCAGAACTTTAGCAAAGTTGACTTACCTAAATACTCTTAAACTTGATAACAACAAGTTAACTGGTCAAATCCCAACAGAATTGGGATTGCTTCCCAGGATTAAATCAATTTCATTTTCTAACAATCATTTGTCAGGGCCAGTGCCTTGGTTCCCCCAAAGGGTGTTGACTGATTTTGCAAACAACAGTGGACTTTGTGGCGCGCCTTTGTCACCTTGCTCTGATGACAAGTCCAATGAATTTCATCAATCATTCAAGACTGGTATTATTGTTGGTTATGCTTTTTCAGTGATGGTTTCTGTGATTGTTGTTTTCATATCCTACTCCAACCGTGCACCTAGTGTGAAATTTAAGCAGGAAGTAAACAGCAACGTAAAAAGAGCTATGGAGCTTGGCAAATATATTTTCTCCATCACAAGGAGGGGAGCACTAAGGATCATGGATCAGATGAGTGAACTGTCACCTCTGCAGCAGCTAGAATGTGGAAGCAATGAGATCTCAGTCCTATTGGAAAGATTTACTTCCACATTGAGGGTTGAAGAACTGCATGATGCAACAGCCTGTTTTGCTATGGACAATGCCATTGGGGTAGGAAAGATGGGAATAATGTACCAAGGAAGGCTACCTTATGGCCAGATCATAGCTGTTAAGAAACTACAAGACTCTCAGCTTTTTACAAGGCAATTCCTTTCAGAAATAATGATTTTGGGAAAGCACAAACACCAAAATATAGTTCCCTTGCTTGGGTTCTGCATTGAAAGAGAGGAAAAGATTTTGGCATACCCTTACATGTCAAATGGAAGGCTTTCCAAATGGTTGCATCCTTTAGAAAGTGAAGTTGTGAGGTTGAAATGGCCAGAGAGGGTCAACATTGCACTTGGGATAGCAAGAGGGCTATCATGGCTCCATCACAACTGCAATTTGCATATAGTCCATTTTAACATATGTTCAGAGTGCATATTGCTAGATGAGAATTTTGAGCCCAAAATATCCAATTTTGGAGAGGCCAAATTTATGGATCTCAACATTGAGAATGATCTAGGCATTGTGTTTAATGTAAAGGATGGGAAGAAGGATGTTTATGACTTTGGAAGTGTGCTTTTTGAACTGATTACAGGGAAAACTTATGACGAACTGAACTGTTCATCCGGCACTAGTAACCTATGTGGCAACCCTTCAAATTTTTATAGTGCAATCGATAAATGTCTGATTGAGGTAGGACATGCAAATGATGTCTGTACTCTCCTCAAAATTGCTTGTGAGTGTGTTCAACCTTTACCGGATCAAAGACCAACAATGCTTGAAGTTTACAACAAAATGGGCAATATATGGAAGGAATTACAAGGATGCATTGATGAATCTGATACTCCCAAGGGATCAGAAACTGCTTCTACTATTAGTACAGATGAAATCACTCAGTTATAA 1833 0.3944 MKGDIFFMTLLIYLLSISITSYCTDSDIFCLRSLNSLEDPNNYITSSWNFNNTEGFICRFNGVDCWPSYENSVLNLKLSNMGLKGQFPRGLENCSSLTGLDLSGNELSGPIPSDINELLPFVTSMDLSGNKFSGEIPRTLAKLTYLNTLKLDNNKLTGQIPTELGLLPRIKSISFSNNHLSGPVPWFPQRVLTDFANNSGLCGAPLSPCSDDKSNEFHQSFKTGIIVGYAFSVMVSVIVVFISYSNRAPSVKFKQEVNSNVKRAMELGKYIFSITRRGALRIMDQMSELSPLQQLECGSNEISVLLERFTSTLRVEELHDATACFAMDNAIGVGKMGIMYQGRLPYGQIIAVKKLQDSQLFTRQFLSEIMILGKHKHQNIVPLLGFCIEREEKILAYPYMSNGRLSKWLHPLESEVVRLKWPERVNIALGIARGLSWLHHNCNLHIVHFNICSECILLDENFEPKISNFGEAKFMDLNIENDLGIVFNVKDGKKDVYDFGSVLFELITGKTYDELNCSSGTSNLCGNPSNFYSAIDKCLIEVGHANDVCTLLKIACECVQPLPDQRPTMLEVYNKMGNIWKELQGCIDESDTPKGSETASTISTDEITQL* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3948 610 Gene3D Transferase(Phosphotransferase) domain 1 400 593 - -
Lja4g3948 610 PANTHER RECEPTOR-LIKE PROTEIN 55 4 577 - -
Lja4g3948 610 Pfam Protein tyrosine and serine/threonine kinase 327 575 IPR001245 GO:0004672|GO:0006468
Lja4g3948 610 Gene3D Ribonuclease Inhibitor 29 210 IPR032675 -
Lja4g3948 610 SUPERFAMILY Protein kinase-like (PK-like) 306 574 IPR011009 -
Lja4g3948 610 ProSiteProfiles Protein kinase domain profile. 325 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g3948 610 MobiDBLite consensus disorder prediction 589 610 - -
Lja4g3948 610 SUPERFAMILY L domain-like 22 205 - -
Lja4g3948 610 Gene3D Phosphorylase Kinase; domain 1 291 399 - -
Lja4g3948 610 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 4 577 - -
Lja4g3948 610 MobiDBLite consensus disorder prediction 591 610 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3948 Lja-Chr4 72472500 72481068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3948 8 585 Receptor kinase-like Gene Family AT3G28450 35.738 4.26e-100 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Lja4g3948 PK_Tyr_Ser-Thr 1.5e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3948 - - mtr:MTR_4g092520 675.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3948 4 72472500 72481068 Lja6g3197 6 60406398 60407952 PCT