Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3945 ATGGCTTCCCGGAACCAGAACAGGCCACCTCGCAGCCCCTTCAACAAAAAGGCGAGCACCGAAGAACTCGCTGTGGAAAAGCGTCAGAGGTTCGGAGCTGACAAGATGGAGCGACAGGGAGTGGCTGGGAGGGGAAGAGCGCCGTTTTCTGTGGTGAATACTGCGAGTGCGGTGAGTGAAGGTGATGGAGTGGAATGTAGTACCGTCGAGTTCACGAAAGAGGATGTTGATGCGTTGCTGAATGAGAAGATGAAAAAGGGCAATCCCTATGATAATAAGAAAAAAATGGAGCAGATGGGGGATCTTATTAAGAGGCTTAAACTTTGCGTTCGATGGTTTAAAAGAGTTGAAGAAGGCTATGTTCAAGAGAAAGAAAAGCTTCAGTCTGAACTTGAGTCTGCTGTTAAGAAGGGCATTGATACTGAGACTGAGATGAAAATTAAGATTGAGGAGTTCAATGAGACTATATCTGATTTGAGGAAGACAATATCTTCTTTAGAAGGTAGACTTTTGAAGGAAGAATCAGAGAAGTTGGAAGCAATTAATTGTTATAGAAAAGAAAAGGAAGCCAGAACTGCAGCTGAGAAGGTTGGAAATGAGAAATCAGCTGAGCTTGAGAAAGTACGGGATGAGAAATCAGTTGCTGAGAAGAAGGCCACTTCAAATGAGGATTTGTACAAGCGTTCACAAGAGTATAATATGAGCCTGCAGCAGTACAATAGTCGTCTTCAATCAGATCTTGAAATAGCTAATGAGTCACATAAACGACTTGAAACAGAGAAAGCAACCATTGTTGAGAGCCTAAGCAATGTGAGAGGTCACAATAAGGCATTGCAGGATCAGTTGGCATCTCTTAAGGTTTCACAGGAAGAGGCTTCCAAACAGAAAGAAGTGCAAGCATATGAACTCAGATGCCTCCGCGAAGAATTAAAACAAATGAGAGATGATCGTGATTGGCATCAGGCACATGCAAATGCTTTAATTGGAGAATTTACAAAATACAAAGAATGTACAGGGAAATCATTTGCTCAATTGGATACCTTGACAATTAAAACAAATGCTCTTGAGGAGACTTGTTCTTCCCAAAAGGAGCAAATAAATATACTGCAGCAGCAATTGATTGCTGAAAAGGAGAAGTTAAAGGTGGCTGATTTATCTGCATCAGAAACAAGAACTGTGTTTGAAGAGCAGAAGAGAATTATACATGAACTAAAAGATCGATTGGCAGATAAAGAATTTCAAGTAGTTGAAGGAGAGAAGCTAAGGAAAAAGCTGCACAATACTATCCTGGAGCTAAAAGGAAATATCCGTGTGTTCTGCCGTGTGCGACCTTCCCTACCAGAGGATAGTACGGGAACCGACATGGTTATTTCTTACCCAATGTCAACAGAAATGGATGGCAGGGGTATTGAATTGGTACAGAATGGGCAAAAGTACCCTTTTACATTTGACAAGGTGTTTAATCATGAGGCTTCTCAGCCTGATGTATTCACAGAGATATCACAGTTGGTGCAAAGTGCACTTGATGGCTACAAGGTATGCATTTTTGCTTATGGACAGACAGGCTCAGGAAAAACCTATACAATGATGGGTAGGCCTGAGGCTCCAGATCTGAAAGGCTTGATACCACGTTCTCTAGAACAGGTATTCCAGACTAGTCAGTCACTGAAAGACCAGGGGTGGAAGTACAAAATGCAGGCATCAATACTGGAAATATATAATGAGACCATCAGGGATTTGTTGTCATCAAATCGGTCAAGTGGGATTGACCAGACGCGAATAGAAAATAGTGTTCCCAGCAAGCAGCAGTACACTATTAAACATGATGCACAAGGAAACACACATGTTTCGGACCTGACAATTGTGGATGTTTGTAGCGTGAATGAGATTTCCTCACTCCTGCAACAGGCAGCACAAAGCAGGTCAGTGGGAAGAACACAGATGAATGAGCAGTCATCAAGAAGCCATTTTGTCTTTAGTTTACGTATCAGTGGTATAAATGAGAACACTGAACAACAAGTCCAAGGTGTCTTAAACCTGATTGATTTGGCTGGAAGTGAAAGACTGTCAAGAAGTGGGGCAACAGGGGACCGATTGAGGGAAACTCAGGCTATCAACAAAAGTCTCTCCTCTTTGAGTGATGTCATATTTGCTTTGGCAAAGAAAGAGGAGCATGTTCCTTTTAGGAATTCGAAACTGACATACCTTCTCCAGCCATGTCTTGGTGGCGATTCCAAAACATTGATGTTTGTCAACATCTCACCTGATCAATCTTCAGTTGGTGAGTCACTCTGTTCTCTCCGCTTCGCGTCCAGAGTAAATGCCTGTGAAATCGGGATTCCGCGACGTCAGACTCAGACATCCACTCGGTCCTTGGATTCTCGGTTGAGCTCTGGCTAA 2400 0.4275 MASRNQNRPPRSPFNKKASTEELAVEKRQRFGADKMERQGVAGRGRAPFSVVNTASAVSEGDGVECSTVEFTKEDVDALLNEKMKKGNPYDNKKKMEQMGDLIKRLKLCVRWFKRVEEGYVQEKEKLQSELESAVKKGIDTETEMKIKIEEFNETISDLRKTISSLEGRLLKEESEKLEAINCYRKEKEARTAAEKVGNEKSAELEKVRDEKSVAEKKATSNEDLYKRSQEYNMSLQQYNSRLQSDLEIANESHKRLETEKATIVESLSNVRGHNKALQDQLASLKVSQEEASKQKEVQAYELRCLREELKQMRDDRDWHQAHANALIGEFTKYKECTGKSFAQLDTLTIKTNALEETCSSQKEQINILQQQLIAEKEKLKVADLSASETRTVFEEQKRIIHELKDRLADKEFQVVEGEKLRKKLHNTILELKGNIRVFCRVRPSLPEDSTGTDMVISYPMSTEMDGRGIELVQNGQKYPFTFDKVFNHEASQPDVFTEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPEAPDLKGLIPRSLEQVFQTSQSLKDQGWKYKMQASILEIYNETIRDLLSSNRSSGIDQTRIENSVPSKQQYTIKHDAQGNTHVSDLTIVDVCSVNEISSLLQQAAQSRSVGRTQMNEQSSRSHFVFSLRISGINENTEQQVQGVLNLIDLAGSERLSRSGATGDRLRETQAINKSLSSLSDVIFALAKKEEHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDQSSVGESLCSLRFASRVNACEIGIPRRQTQTSTRSLDSRLSSG* 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3945 799 CDD KISc_C_terminal 433 778 - -
Lja4g3945 799 Gene3D Kinesin motor domain 374 778 IPR036961 -
Lja4g3945 799 Coils Coil 149 176 - -
Lja4g3945 799 ProSiteProfiles Kinesin motor domain profile. 435 776 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja4g3945 799 Coils Coil 275 295 - -
Lja4g3945 799 MobiDBLite consensus disorder prediction 28 47 - -
Lja4g3945 799 PANTHER KINESIN-LIKE PROTEIN 2 799 - -
Lja4g3945 799 Coils Coil 240 260 - -
Lja4g3945 799 Coils Coil 352 379 - -
Lja4g3945 799 PANTHER KINESIN-LIKE PROTEIN KLP-3 2 799 - -
Lja4g3945 799 PRINTS Kinesin heavy chain signature 646 663 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja4g3945 799 PRINTS Kinesin heavy chain signature 726 747 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja4g3945 799 PRINTS Kinesin heavy chain signature 677 695 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja4g3945 799 PRINTS Kinesin heavy chain signature 510 531 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja4g3945 799 SMART kinesin_4 433 784 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja4g3945 799 Pfam Kinesin motor domain 441 774 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja4g3945 799 MobiDBLite consensus disorder prediction 1 22 - -
Lja4g3945 799 ProSitePatterns Kinesin motor domain signature. 676 687 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lja4g3945 799 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 394 774 IPR027417 -
Lja4g3945 799 Coils Coil 117 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3945 Lja-Chr4 72412759 72418850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3945 407 773 Calmodulin-binding Proteins AT5G65930 39.946 8.70e-79 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3945 K10405 - gmx:100818473 1201.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3945 4 72412759 72418850 Lja6g3191 6 60358113 60364691 PCT