Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3929 ATGGAGTTGCTTCCTCAACCAATGATTTCCCCTCTAATCCTGCTTGTTATTTGTTACTTTTATCTTGGAGCAGCCATAGATTGTGGTGGAAACCACATTTCAAAAACCATTACCATCGATAAATCTGGCAGTGGAGGAGCATTTGGAAGCATTCAAGCTGGTATTAATTCTATAGAGAGTAACAATGCCCAGTGGGTTAAGATTCACATAAATTCTGGCGTGTACACGGAAAAAGTTTCAATTCCATATGATAAACCATGCATTATCTTAGAAGGAGAAGGCGGTCGCAATACAGTCATTTCTTATGGTGATACCCGAACACCTGCTAGCTGGGAAGCTACATTCACTTCAAGTCCACCTAATGTGATAGTGAGTGGCATCACCTTTGAGAACACATATAATTTGGTAGGGGGTAATATACCGAGTATGAATCCCAAAGCGGACATTAAAGTAGCAGTGGCAGCTGTTGTAGCTGGAGACAAATCCTTCTTCTTCCAGTGTAGTTTCCTGGGTTATCAAGACACTCTCATTGCTGCGATGGGACGCCATTACTATAAAGATTGCTACATTCAAGGTGAGGTGGACTTCATTGCTGGTGCCGGGCAATCTTATTTTGAGGATTGCAAAATCAATGTCACACATGGACAGGGTTATGTTCCTGGTTTTATCACAGCTCAATCCAGGGCTTCACCAAATGACCCAAATGGTTTTGTTTTTGAGGGAGGTTCGGTTGATGGGACTGGTAAGGTGAATCTAGGAAGAGCATGGGGCCCTTGCTCGAGAGTTATATTTCATAAAACGTACCTTTCTTCAGTGGTGACCCGAAAAGGATGGAGCTTTTGGAACTTTCCTGGTCAAATTACCTATGCAGAAGTTGACTGTACAGGACCTGGGGCTAATAGTCCCCTCCGTGTCACGTGGGAGAAGAATATAACTGCTTCAGAACTACAAGAATATTCCAAATCATCTTTCATTGATGAAGATGGATGGCTTGCCAACATTCCAATTAAGTACTAG 1017 0.4258 MELLPQPMISPLILLVICYFYLGAAIDCGGNHISKTITIDKSGSGGAFGSIQAGINSIESNNAQWVKIHINSGVYTEKVSIPYDKPCIILEGEGGRNTVISYGDTRTPASWEATFTSSPPNVIVSGITFENTYNLVGGNIPSMNPKADIKVAVAAVVAGDKSFFFQCSFLGYQDTLIAAMGRHYYKDCYIQGEVDFIAGAGQSYFEDCKINVTHGQGYVPGFITAQSRASPNDPNGFVFEGGSVDGTGKVNLGRAWGPCSRVIFHKTYLSSVVTRKGWSFWNFPGQITYAEVDCTGPGANSPLRVTWEKNITASELQEYSKSSFIDEDGWLANIPIKY* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3929 338 Gene3D - 30 338 IPR012334 -
Lja4g3929 338 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 1 336 - -
Lja4g3929 338 SUPERFAMILY Pectin lyase-like 33 334 IPR011050 -
Lja4g3929 338 Pfam Pectinesterase 38 327 IPR000070 GO:0030599|GO:0042545
Lja4g3929 338 PANTHER PECTINESTERASE 1 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3929 Lja-Chr4 72289208 72290870 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3929 14 286 Carbohydrate Esterase AT2G19150 43.116 3.06e-65 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3929 - - var:108336510 372.474