Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3926 ATGAGCTTGTCTATGTTAGTTTTTCTTATTAATTTGAATTCCATCTTGCAGACTTATATTATCTACACAGGCGCTAGCATGAATGATGAAGCTGCTTCACTTTCCATTCATGAAAACAAGTTACAACAATCTCTAACACACCGCTACAAACGTAGTTTCAGTGGCTTTGCTGCGAAACTAACCAAAGAAGAAGCAGATAAATTGGCTGGACTTGATGGGGTGATATCTGTCTTTCCTAGTACAAAGAGATCACTTCAGACAACAAAGTCGTGGGATTTTATTGGCTTTCCATTAAACGTGGAAAGAACAAATTTTGAACGTGATATCATCATTGGATTTCTTGATTCTGGAATCTGGCCAGAATCTGAAAGTTTCAATGATAGAGGATTAGGCCCCCCACCTAGTAAATGGAAGGGAACCTGTCAAACCTATTCTAATTTCACTTGCAACAATAAAATAATTGGTGCTAGATGTTACGGAGAAGACTCCTTGAATAAAGAATTCTTGTCTCCAAGAGACTCAATTGGGCATGGGACTCATACTGCTTCAATAGCAGCTGGTAACCCAGTTTGCGGGGCAAGCATGTTAGGCCTGGCAGAAGGAACAACAAGAGGAGGGGCAACATCAGCCCGTATTGCAGTCTACAAAGTCTGCAGGGGCGAAGAATGCGATGATGCAGACATTCTATCTGCATTTGATGATGGCATTGCTGATGGGGTTGACATCTTTTCGGTCTCAATAGGAGCGAGTGACACTGACAAGGCTGTAAATTATTTTGGAAGCAGTATATCCATAGGATCATTTCATGCCATGAGACATGGGATACTGACAGTAGCATCAGCTGGAAACTCGGGTCCAACACTTGGGGCTGTAGATAATGTCCAGCCTTGGTCAATTTCTGTGGCGGCTAGCACCATTGATAGAAACTTTGTGACAAAAGTAAAATTAGGAGACAACAGAATTTATGAGGGAATCTCATTAAATACATTTGATCTTAAGGGAAAATTATATCCTCTCATCTTTGCGGGTGATGCACCCAATACTAAAGCAGGCATCAATGGATCTAAATCCAGGTTTTGCAACTATGGTTCGTTGGACCAAAATTTGGTGAAGAACAAAATTGTTCTCTGCCAGAGTGCATACCCAAATGAAACTGGTCCTGTTGGTTTCCTCTCAACTGCTCAAACTTCTGCACCGCTCGCACTCCCTTATGCCTTGCCCGGATCTTACCTCGACTTGAAGGATGCTGTCTCTATATTCAAATACATAAGATCCACAAGGGATTCAAGTGCAACCATATTTAAGACCGATGAGTTAGAAGATACTTCAGCCCCTGAGGTAGCCGATTTCTCATCAAGAGGTCCAAACTTAATAACCCCTGAAATACTCAAGCCGGATTTGACTGCTCCTGGAGTAACCATCCTAGCTAGTTGGTCCCCAATAGCCCCTGTTTCGAACTCTGATTATGACCGCAGAGAGTTAAAATTCAATATTAAGTCAGGCACATCAATGTCCTGCCCACACGTGTCTGGTGCAGCAGCTTACATCAAATCATTTCATCCGACGTGGTCTCCTGCTTCTATACGCTCAGCTCTAATGACAACAGCGAAACCTCTTAATCCCTTAAATAACATGGAAGCAGAGTTGGCATATGGAGCAGGCCAAATTATTCCATCCAAGGCTTTGACTCCTTGTTTAGTATATGATATTACAGAAAGGGACTATACAAGTTTTTTGTGTGGACAGGGCTATAGCCTAATGTCTATACAACTCATCATGGGGGGTAATAGCAGCTTCTGTGGGACAACTAATGAATCAGCAAGGGATCTGAACTACCCTTCGTTTTCTCTGGAAGTCCCTCACTCAGATCATACTGTATTTGCCAGGTTCAAGAGGACAGTCACAAATGTTGGCTCTCCAATGTCAACATATAAAGCCACTGTTGTGACTGCTGCTAAGGGACTCGAAATCAAAGTGACACCAAATGTTTTGGCATTCAATTCTCTTGGTCAAACAAAAACATTTGTGCTCACTCTTGATGGAGTGCTAACTGAACCTATTGTGTCAGCTTCTTTGGTTTGGGACGATGGAACATTCCAAGTGAGAAGCCCAATTGTCGTGTTTGATGTAGTGGGTTTTAATCCATCCACACCAGCTTCCCATTCCACATCTTTTTCCCCTTGTCTCTCTTTGCTTTTCCTATCTCTCATTTTTTTCATCCACTTATCTCTCTTTCGGTGTGTATGA 2247 0.4223 MSLSMLVFLINLNSILQTYIIYTGASMNDEAASLSIHENKLQQSLTHRYKRSFSGFAAKLTKEEADKLAGLDGVISVFPSTKRSLQTTKSWDFIGFPLNVERTNFERDIIIGFLDSGIWPESESFNDRGLGPPPSKWKGTCQTYSNFTCNNKIIGARCYGEDSLNKEFLSPRDSIGHGTHTASIAAGNPVCGASMLGLAEGTTRGGATSARIAVYKVCRGEECDDADILSAFDDGIADGVDIFSVSIGASDTDKAVNYFGSSISIGSFHAMRHGILTVASAGNSGPTLGAVDNVQPWSISVAASTIDRNFVTKVKLGDNRIYEGISLNTFDLKGKLYPLIFAGDAPNTKAGINGSKSRFCNYGSLDQNLVKNKIVLCQSAYPNETGPVGFLSTAQTSAPLALPYALPGSYLDLKDAVSIFKYIRSTRDSSATIFKTDELEDTSAPEVADFSSRGPNLITPEILKPDLTAPGVTILASWSPIAPVSNSDYDRRELKFNIKSGTSMSCPHVSGAAAYIKSFHPTWSPASIRSALMTTAKPLNPLNNMEAELAYGAGQIIPSKALTPCLVYDITERDYTSFLCGQGYSLMSIQLIMGGNSSFCGTTNESARDLNYPSFSLEVPHSDHTVFARFKRTVTNVGSPMSTYKATVVTAAKGLEIKVTPNVLAFNSLGQTKTFVLTLDGVLTEPIVSASLVWDDGTFQVRSPIVVFDVVGFNPSTPASHSTSFSPCLSLLFLSLIFFIHLSLFRCV* 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3926 748 CDD PA_subtilisin_like 314 433 - -
Lja4g3926 748 PANTHER CUCUMISIN-LIKE 37 714 - -
Lja4g3926 748 SUPERFAMILY Subtilisin-like 85 565 IPR036852 GO:0004252|GO:0006508
Lja4g3926 748 Pfam Peptidase inhibitor I9 36 85 IPR010259 -
Lja4g3926 748 Gene3D - 579 710 - -
Lja4g3926 748 CDD Peptidases_S8_3 85 536 IPR034197 -
Lja4g3926 748 Pfam Fibronectin type-III domain 609 707 IPR041469 -
Lja4g3926 748 ProSiteProfiles Serine proteases, subtilase domain profile. 90 563 - -
Lja4g3926 748 Gene3D Peptidase S8/S53 domain 108 575 IPR036852 GO:0004252|GO:0006508
Lja4g3926 748 Gene3D - 307 440 - -
Lja4g3926 748 ProSitePatterns Serine proteases, subtilase family, serine active site. 501 511 IPR023828 -
Lja4g3926 748 Pfam Subtilase family 107 554 IPR000209 GO:0006508|GO:0008236
Lja4g3926 748 PRINTS Subtilisin serine protease family (S8) signature 500 516 IPR015500 -
Lja4g3926 748 PRINTS Subtilisin serine protease family (S8) signature 106 125 IPR015500 -
Lja4g3926 748 PRINTS Subtilisin serine protease family (S8) signature 173 186 IPR015500 -
Lja4g3926 748 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 37 714 IPR045051 -
Lja4g3926 748 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 11 86 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3926 Lja-Chr4 72103444 72108803 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3926 17 708 Subtilisin-like Serine Gene Family AT5G59100 46.648 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3926 - - gmx:100784447 913.679