Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3922 ATGAGAGGACTCCATTTCTTCTTTTTCTGCTTCTCCACCTCACTCACCTTTTTCTCCGCCACCATTACCACCACTTCAACAACCTCTTCTTCTGATACCTTAACACCAACCCAATCCCTCACTCTAAACCAAACCTTGTTATCCTCAAACCAAATCTTCCAGCTCGGTTTCTTTCCCACCTCTGACTCCACCTGGTACCTTGGAATCTGGTACACCACCATTGATGACAACAAAAGAACTGTAGTCTGGGTAGCAAACAGAGACACCCCACTTCAAAATTCAGCTGGATTCCTCAAAATCACCGACACCGGAAACCTTGTTGTCCTCGAAAACAAGTCCCAGAAACCTGTCTGGTCTTCCTTAAATCAAACAACCGCCGCCACCACCACCAGCCCTGTAATTCTTCAGCTTCTGGATTCAGGGAATTTGGTTCTGAAAGATCCTAACAAAATTCTATGGCAGAGCTTCGATTATCCTACCGACACCTTGTTACCAGGAATGAAACTGGGGTGGAACTTTGACACGGGGAAGGAAACACACATAACCTCGTGGAAGAACACAGATCAAGACCCTTCAATCGGTGACATTTCATTCAAGTTTGAACCCCATGGCTACCCAGAAATCTTCCTCTGGAGAAAAAACAAGAGAGTTTACAGAAGTGGACCATGGAATGGTGAGAGATTCAGTGGGGTACCTGAGATGCAAAAAATTACAAATTCAATTAAGTTCAATTTTTTCATGGATGAGCATGAGGTTTACTACATGTTCTCAATTGAGAAGAAATCGTTGCTTTCGCGATTATCCGTGAACTCAATTGGGGAGCTTCAACGCTTGACATGGATAGAGAGCTCACATATTTGGAGTAAATTCTGGTATGCACCGAAAGATCAATGTGATAACTACAGAGAGTGCGGTCCTTATGGTCTTTGTGACGCGAATTCTTCGCCGGTTTGCAAGTGTGTGAAGGGGTTCTGGCCTAAGGATCAGCAGGCGTGGAATTTGCGAGACGGGTCTGATGGATGTGTGAGGAGAACTGATTTGGAATGTGGGAGTGATAAGTTTCTGCATTTGGAGAATGTGAAGTTGCCGGAGACGAGTAGGGTGTTTGTGAATAGGAGCATGGGGATTGTGGAGTGTAGAGAGTTGTGCTTGAGGAATTGTTCTTGTACTGGTTATGCTAATTTGGAGATCACTAATGGAGGAAGTGGTTGTGTGATTTGGGTTGGGGAGCTTGTAGATATAAGGCAGTATCCTGAGGGTGGGCAAGATCTCTATGTCAGATTAGCAGCTTCTGATGTAGATGACACAGTGTTTGGAGGTGGGACTCACAAGGCTTTAAGAATCATAATAATTGGAGGGGCAGCTTTGATGCTTTTGGTTTCTGGTATGATCTGTTTCTTATGGAAGAAGAGGAAATTGCAATGTATATTGAAAGGGAAAAAGGAACAAAGAGGTTTTTCTGAGAGAAGTCAGGATTTGCTAATGCCTGAGGTGGTGTTTTCAAGTAATAGAGAGCAGACTGGTGAAAGGAACATGGAAGACATAGAAATGCCATTGTTTGATTTTAATACCATAACAATTGCTACAGACAATTTCTCTGAAGAAAATAAACTTGGACAAGGAGGCTTTGGCAGTGTTTACAAAGGCAGATTGAAGGAAGGTCATGATATTGCTGTGAAGAGATTGTCACAAACTTCTGGGCAAGGTGTGGAAGAATTTAAAAATGAGGTCAAATTAATTGTTAAACTTCAACATCGAAATCTCGTTCGGCTACTTGGTTGCAGCATTGAGAGGGATGAGAAGCTGCTAGTGTATGAGTACATGGAGAATAGAAGCCTTGATTCCATTTTGTTTGATAAGGCAAAAAGATCCTTATTGGACTGGCAAAGGCGTTTCAACATTATATGTGGAATAGCTAAAGGACTTCTTTATCTACACCAAGATTCCAGACTTAAGATCATCCATAGAGATCTTAAGGCAAGCAACATTTTACTTGACAAAGAGATGAACCCAAAGATATCAGACTTTGGGATGGCTAGAATTTTTAGTTCTGATCAGACTGAAGCAAATACAATGAGAGTTGTTGGAACATATGGCTACATGTCCCCTGAATATGCAATGGATGGGAACTTCTCAGTGAAATCTGATGCTTTTAGTTTTGGGGTTCTTGTGCTGGAGATTGTAAGTGGAAAGAAGAACAGAGGATTCTATTATGCAAACAAAGAATTAAATCTTCTAGGACATGCATGGAAGCTGTGGAATGAAGGAAATGCATTAGAACTGATTGATTCTTCCATTGACAAATCATATTCACCATCTGAAGTTCTTAGATGCATACAAGTTGGGTTGTTATGTGTACAAGAGCGACCAGAAGATAGGCCAACAATGTCTTCAGTGGTTTTGATGCTGAGCAGTGAAACTGCAACAATGCAACAGCCCATGAACCCTGGGTTTTGCCTTGGAAGGAATCCTGTTGAAACTGATTCTTCTACAAGTAAACAAGATGAATCATGCACAGTGAACCATGTCACTGTTACAATGAGGAACTCCATGCACTCTGCTAAAAATCCTCTCTGCCTTGTCATGTGCCAAACTCACAAAAGTAAGTTACATAATACCAGTTTGCTTGTTAACTACTTGATTCTAATCCTCAGCTTCTCATTATGCTCTTGTTCTGACACCATATCTAATGACAAACCAATCAAAGATGGTGAGCTTCTTGTTTCTAAAGATAAAACCTTTGCTCTTGGATTCTTCAGCCCAGGCAAGTCCTCATCCCGCTACGTCGGAATCTGGTTCAACAATTTACCTGAGAAAACAGTTGTTTGGGTTGCAAACAGAGATAATCCTATCAATGACACCACTGGGGTTCTCTCAATCAACCCAGATGGAAATCTAGTCCTCCACAACAACTTTAGCACCATTCCCATTTGGTCTACCAATGTTAATTCAGGTTCAGCTAACAGCAGCACCAATGTTATAGCTCAGCTCTCAGATATAGCAAACCTTGTCCTGATTCTGAACACCACCAAAACTATCATCTGGCAAAGCTTTGATCATCCTACAGACACCATGCTTCCATATCTAAAGGTTGGTTTTGATAGAAGAACTAACAAGAGCTTGTTCCTCCAATCATGGAAAACAGATGATGACCCTGGAAGAGGTGCTTTTACATTGAAATTCAGCACCAGTGGGAAACCTCAGTTGTTTGTTTACAGACATAACTTTCCTTGGTGGCGCGGTGGATCATGGAACGGGGAATTATTGATGGGTATACCCAACATGAAACGAGACATGGCCACTTTTAATGTGTCTTTTATAGAAGATGATAACCATGTAGAACTGTCATATAACATGTTTGATAAGTCCCTCATCACAAGGATAGTAGTTCAGCAATCAGGTTTCTTTCAAACATTCACTTGGGATAATCAAAAGAGTCAATGGAACCGGTACTGGTCAGAACCAACAGATCAATGTGATAACTATGGAACCTGTGGATCAAACAGTAACTGTGACCCTTTGAACTTTGAGGAGTTTCAGTGTAGTTGTCTACCTGGATTTGAGCCCAAATTCCCGCGTGAATGGTATGAGAATAGAGATGGCTCAGGAGGGTGTGTGAGGAAGCAAGGTGCAGCATCTGTTTGTGATGATGGAGAAGGGTTTGTCAAAGTTGAAGGCTTGAAGGTTCCTGATACATCTGTGGCAATTGAAAAAAAGGGTTTGAGTTTGGAAGAGTGTGAGCAGGAATGCTTGAGAAACTGCTCTTGTGAAGCCTATGCAGTTGCTGATGTGAGGAATGGTGGAAGTGGATGCTTGGCATGGCATGGGAATTTAATGGACACGCAGAAACTAAGCGATCAAGGCCAAGATTTATTCGTACGCGTTGATGCAGTAGAACTAGCCAATTACTACAAAAAAAGTAAAGGGGTGCTTGGTAAAAAGAGGATCATTGCAATCCTGGTAGCTTCTGTACTTGCAATTTTCCTTCTGGCCAGTGTGTATTACCTGTGGAAGATAAAAGGCAAAGGTATGTATAAAGTGATGCGATACTTAAACCAAAGTTCCCCTCAAGAAGAGAACGATGTTCAGAGCAACACACAACCAAATCTTCCCTTTTTCAGCTTTAAAATGATAATGGCAGCCACAGGAAATTTCAGCCATCAGAATAAGCTTGGGCAAGGTGGATTTGGCTCTGTCTATAAGGGCCAATTAATTAATGGACAAGAGATAGCTGTGAAAAGATTGTCCGAAAATTCAGGTCAAGGGACAGAAGAGTTTAAAAATGAAGTGACACTACTTGTTAAACTCCAACATAGAAACCTGGTGAGGTTGCTCGGTTGTTGCTGTGAAAAAGAAGAAAGGATGCTAGTTTATGAATACCTACCAAACGAAAGCTTGGACTTCTTCATATTTGGTAAAAACCAAAGGCCATTGGATTGGGATAAGTGTTTTGAAATTATTATTGGGATTGCCCGAGGTGTTCTATATCTTCACCAAGATTCAAGGCTGAAAATAATTCACAGAGATCTAAAAGCCAGCAATGTTCTCCTTGATGGTGCAATGAATCCCAAAATCTCGGATTTTGGCATGGCTAGAATATTTGGAGAAGATCAAATTCAAGAAAGAACAAAAAGAGTGGTTGGAACATATGGATATATGTCACCAGAATATGCAATGGAAGGAAGATATTCAACAAAATCTGATGTCTTCAGTTATGGGGTCTTACTATTGGAGATTATTGCTGGCAAGAGGAACACAGATAATGATCCTGGAAGAGCCTCTCCAAACTTAATTGGATATGTGTGGATGCTTTGGACAGAAGGAAGGGCCTTGGATATAGTTGATTCAACACTAGGCCAACCATCCATGTTAGAAGTTGTTTTCATGCTAGGAAATGAAACACCTCTTCGGGGACCCCAAAAGCCAGCATTTCTATTCAATGGCAACCGAGATTCGCAAGAGTCATCATCAGGAGGAGGATCTTCAGTAAATGAAATAACAGTAACTACAATCGATGCTCGGTAG 5025 0.4135 MRGLHFFFFCFSTSLTFFSATITTTSTTSSSDTLTPTQSLTLNQTLLSSNQIFQLGFFPTSDSTWYLGIWYTTIDDNKRTVVWVANRDTPLQNSAGFLKITDTGNLVVLENKSQKPVWSSLNQTTAATTTSPVILQLLDSGNLVLKDPNKILWQSFDYPTDTLLPGMKLGWNFDTGKETHITSWKNTDQDPSIGDISFKFEPHGYPEIFLWRKNKRVYRSGPWNGERFSGVPEMQKITNSIKFNFFMDEHEVYYMFSIEKKSLLSRLSVNSIGELQRLTWIESSHIWSKFWYAPKDQCDNYRECGPYGLCDANSSPVCKCVKGFWPKDQQAWNLRDGSDGCVRRTDLECGSDKFLHLENVKLPETSRVFVNRSMGIVECRELCLRNCSCTGYANLEITNGGSGCVIWVGELVDIRQYPEGGQDLYVRLAASDVDDTVFGGGTHKALRIIIIGGAALMLLVSGMICFLWKKRKLQCILKGKKEQRGFSERSQDLLMPEVVFSSNREQTGERNMEDIEMPLFDFNTITIATDNFSEENKLGQGGFGSVYKGRLKEGHDIAVKRLSQTSGQGVEEFKNEVKLIVKLQHRNLVRLLGCSIERDEKLLVYEYMENRSLDSILFDKAKRSLLDWQRRFNIICGIAKGLLYLHQDSRLKIIHRDLKASNILLDKEMNPKISDFGMARIFSSDQTEANTMRVVGTYGYMSPEYAMDGNFSVKSDAFSFGVLVLEIVSGKKNRGFYYANKELNLLGHAWKLWNEGNALELIDSSIDKSYSPSEVLRCIQVGLLCVQERPEDRPTMSSVVLMLSSETATMQQPMNPGFCLGRNPVETDSSTSKQDESCTVNHVTVTMRNSMHSAKNPLCLVMCQTHKSKLHNTSLLVNYLILILSFSLCSCSDTISNDKPIKDGELLVSKDKTFALGFFSPGKSSSRYVGIWFNNLPEKTVVWVANRDNPINDTTGVLSINPDGNLVLHNNFSTIPIWSTNVNSGSANSSTNVIAQLSDIANLVLILNTTKTIIWQSFDHPTDTMLPYLKVGFDRRTNKSLFLQSWKTDDDPGRGAFTLKFSTSGKPQLFVYRHNFPWWRGGSWNGELLMGIPNMKRDMATFNVSFIEDDNHVELSYNMFDKSLITRIVVQQSGFFQTFTWDNQKSQWNRYWSEPTDQCDNYGTCGSNSNCDPLNFEEFQCSCLPGFEPKFPREWYENRDGSGGCVRKQGAASVCDDGEGFVKVEGLKVPDTSVAIEKKGLSLEECEQECLRNCSCEAYAVADVRNGGSGCLAWHGNLMDTQKLSDQGQDLFVRVDAVELANYYKKSKGVLGKKRIIAILVASVLAIFLLASVYYLWKIKGKGMYKVMRYLNQSSPQEENDVQSNTQPNLPFFSFKMIMAATGNFSHQNKLGQGGFGSVYKGQLINGQEIAVKRLSENSGQGTEEFKNEVTLLVKLQHRNLVRLLGCCCEKEERMLVYEYLPNESLDFFIFGKNQRPLDWDKCFEIIIGIARGVLYLHQDSRLKIIHRDLKASNVLLDGAMNPKISDFGMARIFGEDQIQERTKRVVGTYGYMSPEYAMEGRYSTKSDVFSYGVLLLEIIAGKRNTDNDPGRASPNLIGYVWMLWTEGRALDIVDSTLGQPSMLEVVFMLGNETPLRGPQKPAFLFNGNRDSQESSSGGGSSVNEITVTTIDAR* 1675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3922 1674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 653 665 IPR008271 GO:0004672|GO:0006468
Lja4g3922 1674 ProSiteProfiles PAN/Apple domain profile. 1215 1296 IPR003609 -
Lja4g3922 1674 CDD B_lectin 38 159 IPR001480 -
Lja4g3922 1674 Pfam Protein tyrosine and serine/threonine kinase 1387 1583 IPR001245 GO:0004672|GO:0006468
Lja4g3922 1674 Pfam Protein tyrosine and serine/threonine kinase 535 801 IPR001245 GO:0004672|GO:0006468
Lja4g3922 1674 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 225 IPR036426 -
Lja4g3922 1674 ProSiteProfiles Protein kinase domain profile. 1385 1674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g3922 1674 Pfam PAN-like domain 349 414 IPR003609 -
Lja4g3922 1674 Pfam PAN-like domain 1215 1281 IPR003609 -
Lja4g3922 1674 ProSiteProfiles PAN/Apple domain profile. 349 429 IPR003609 -
Lja4g3922 1674 ProSiteProfiles Bulb-type lectin domain profile. 31 158 IPR001480 -
Lja4g3922 1674 CDD STKc_IRAK 538 803 - -
Lja4g3922 1674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1505 1517 IPR008271 GO:0004672|GO:0006468
Lja4g3922 1674 ProSiteProfiles Bulb-type lectin domain profile. 892 1018 IPR001480 -
Lja4g3922 1674 Gene3D Transferase(Phosphotransferase) domain 1 608 816 - -
Lja4g3922 1674 Gene3D Transferase(Phosphotransferase) domain 1 1461 1635 - -
Lja4g3922 1674 SUPERFAMILY alpha-D-mannose-specific plant lectins 941 1052 IPR036426 -
Lja4g3922 1674 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 22 849 - -
Lja4g3922 1674 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 880 1673 - -
Lja4g3922 1674 ProSiteProfiles Protein kinase domain profile. 532 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g3922 1674 Pfam Receptor serine/threonine kinase 488 522 IPR022126 GO:0004674
Lja4g3922 1674 CDD PAN_AP_plant 1216 1295 - -
Lja4g3922 1674 ProSitePatterns Protein kinases ATP-binding region signature. 1391 1413 IPR017441 GO:0005524
Lja4g3922 1674 SMART blect_4 898 1021 IPR001480 -
Lja4g3922 1674 SMART blect_4 37 159 IPR001480 -
Lja4g3922 1674 SUPERFAMILY Protein kinase-like (PK-like) 511 803 IPR011009 -
Lja4g3922 1674 ProSitePatterns Protein kinases ATP-binding region signature. 538 560 IPR017441 GO:0005524
Lja4g3922 1674 SMART serkin_6 532 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g3922 1674 SMART serkin_6 1385 1629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g3922 1674 MobiDBLite consensus disorder prediction 1646 1674 - -
Lja4g3922 1674 CDD PAN_AP_plant 345 429 - -
Lja4g3922 1674 Gene3D Phosphorylase Kinase; domain 1 1346 1460 - -
Lja4g3922 1674 Pfam S-locus glycoprotein domain 218 327 IPR000858 GO:0048544
Lja4g3922 1674 Pfam S-locus glycoprotein domain 1079 1191 IPR000858 GO:0048544
Lja4g3922 1674 ProSiteProfiles EGF-like domain profile. 1155 1193 IPR000742 -
Lja4g3922 1674 Gene3D Phosphorylase Kinase; domain 1 506 607 - -
Lja4g3922 1674 Pfam Domain of unknown function (DUF3403) 805 847 IPR021820 GO:0004674
Lja4g3922 1674 Pfam D-mannose binding lectin 940 1047 IPR001480 -
Lja4g3922 1674 Pfam D-mannose binding lectin 80 185 IPR001480 -
Lja4g3922 1674 SMART ntp_6 1216 1295 IPR003609 -
Lja4g3922 1674 SMART ntp_6 349 428 IPR003609 -
Lja4g3922 1674 CDD B_lectin 898 1021 IPR001480 -
Lja4g3922 1674 CDD STKc_IRAK 1391 1630 - -
Lja4g3922 1674 PANTHER - 22 849 - -
Lja4g3922 1674 PANTHER - 880 1673 - -
Lja4g3922 1674 SUPERFAMILY Protein kinase-like (PK-like) 1362 1626 IPR011009 -
Lja4g3922 1674 Gene3D Hepatocyte Growth Factor 1213 1293 - -
Lja4g3922 1674 MobiDBLite consensus disorder prediction 1643 1674 - -
Lja4g3922 1674 Gene3D - 25 156 IPR036426 -
Lja4g3922 1674 Gene3D - 887 1019 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3922 Lja-Chr4 71962983 71974715 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3922 520 828 Receptor kinase-like Gene Family AT4G11530 62.903 1.12e-129 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lja4g3922 PK_Tyr_Ser-Thr 1.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3922 - - aprc:113859914 1875.91