Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3894 ATGCAGGGGAGACATGTTGTGGCGAGGGAGAAGCGAGGTTTGGATTCGGCTTCTGCTGAAGAAGGACAGCCTGATCGAAAACGACCAGCTTTGGCTAGTGTAATTGTTGAAGCACTGAAGGTGGACAGTCTGCAGAAACTTTGCTCATCACTAGAGCCAATTCTACGCAGAGTTGTTAGTGAAGAAGTGGAGCGTGCTTTGGCAAAACTAGGCCCTGCCAATCTTAATAGGAGGTCTTCCCCAAAACGCATAGAAGGTCGTGATAGAAGAAATTTACAACTGCACTTCAAAACCAGGCTATCCCTTCCCCTCTTTACTGGTGGGAAAGTGGAAGGTGAGCAAGGGGCAGCCATACATATTGTTTTGATTGATGCAAACACGGGCAAAGTTGTCACATCAGGTCCCGAGTCATGTGTCAAATTGGATGTCATTGTGCTTGAGGGGGATTTCAATAATGAGGACGACGATAATTGGAGCGAAGAAGAGTTTGAGAGTCATATTGTGAAAGAGCGGGAAGGAAAAAGGCCTCTTCTGACTGGTGATCTGCAAGTCACTCTGAAGGAGGGTGTAGGGACATTGGGTGAGCTCTCCTTTACAGACAACTCAAGCTGGATAAGGAGTAGGAAGTTCAGGTTGGGTCTGAAAGTTGCCTCTGGTTATTCTGAGGGAATGCATATTCGTGAAGCCAAAACAGAAGCCTTCACTGTTAAGGATCATCGTGGAGAATTATACAAGAAACACTACCCACCTGCCTTGACGGATGAGGTCTGGAGACTTGAGAAAATTGGAAAGGATGGTTCCTTTCACAAAAGGCTAAGTAAAGCAGGAATATTTACTGTGGAAAACTTCCTAAGACTAGTGGTCAGAGACCCTCAGAGATTGCGTAATATTCTTGGGAGCGGCATGTCAAATAAAATGTGGGATATCCTTGTTGAGCATGCTAAGACCTGTGTTCTCAGTGGAAAGCTTTACGTATACTATCCTGATGATACAAGAAACGTAGGTGTTGTTTTCAATAACATATATGAATTGAGTGGCTTAATCACCAATGACCAATACTATTCAGCTGATTCTCTCTCTGAGAATCAAAAGGTTTATGTAGACACGCTGGTAAAGCAGGCATATGATAATTGGATGCATGTTATTGAGTATGATGGGAAGACTCTGCTAAGTTGCAATCAGGATAAGACTTTAGAAACCGCTCACCCTCAGGCTTCAATGGGCTCCCATGAATATTCAAATTCAATTCAGCAGATTTCCATCCCAAGTTTGCCACAACCAGTACATACAGGCCAACCATCAATGGATACAGGAGTTACAGTTGAAGGTTATCATGATGTTACAGCTACCAGATTCTCCATGCAACCACAAAATGCAAATCTTAATTCTTCTATTCAATTTGATGACAATGCATTTCCACAACAAAACCAATTGATGAGTATATCCCACCAATCTCAGCTTCCAAGAAATGAAAACGGGCTGACCTTTGGTCCCCAACAATCAGCCACACATGGCTTCCAGACTGCCAGCGTTTCGAATTCTACTTACAGAGGACTTGAGGACTTTTTCCCAGAGGAGGAGATTCGTCTTAGAAGTCATGAGATGCTAGAAAATGAAGATATGCAGCATCTGCTGCGTATTTTTAACATGGGTGGCCAAGCACATGCTTCCTTTAATGCCCATGAAGATGGGTACCCTAATTCATCTTCTTACATGAATGCAAACGCAATGAGCTACAGTTTTGATGATGAGCCAAACCGTTCCTCAGGCAAAGCTGTTGTAGGCTGGCTCAAGCTTAAGGCAGCATTAAGATGGGGTATTTTCGTTCGGAAGAAGGCTGCTGAGAGACGGGCTCAGCTCGTTGAGTTGGATGATTCGTAA 1881 0.4386 MQGRHVVAREKRGLDSASAEEGQPDRKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPANLNRRSSPKRIEGRDRRNLQLHFKTRLSLPLFTGGKVEGEQGAAIHIVLIDANTGKVVTSGPESCVKLDVIVLEGDFNNEDDDNWSEEEFESHIVKEREGKRPLLTGDLQVTLKEGVGTLGELSFTDNSSWIRSRKFRLGLKVASGYSEGMHIREAKTEAFTVKDHRGELYKKHYPPALTDEVWRLEKIGKDGSFHKRLSKAGIFTVENFLRLVVRDPQRLRNILGSGMSNKMWDILVEHAKTCVLSGKLYVYYPDDTRNVGVVFNNIYELSGLITNDQYYSADSLSENQKVYVDTLVKQAYDNWMHVIEYDGKTLLSCNQDKTLETAHPQASMGSHEYSNSIQQISIPSLPQPVHTGQPSMDTGVTVEGYHDVTATRFSMQPQNANLNSSIQFDDNAFPQQNQLMSISHQSQLPRNENGLTFGPQQSATHGFQTASVSNSTYRGLEDFFPEEEIRLRSHEMLENEDMQHLLRIFNMGGQAHASFNAHEDGYPNSSSYMNANAMSYSFDDEPNRSSGKAVVGWLKLKAALRWGIFVRKKAAERRAQLVELDDS* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3894 626 PANTHER OS02G0177800 PROTEIN 3 624 IPR012416 GO:0005516
Lja4g3894 626 MobiDBLite consensus disorder prediction 1 27 - -
Lja4g3894 626 Pfam Calmodulin binding protein C-terminal domain 322 384 IPR046829 -
Lja4g3894 626 PANTHER CALMODULIN-BINDING PROTEIN 3 624 - -
Lja4g3894 626 MobiDBLite consensus disorder prediction 1 28 - -
Lja4g3894 626 Pfam Calmodulin binding protein central domain 252 317 IPR046830 -
Lja4g3894 626 Pfam Calmodulin binding protein-like N-terminal domain 92 239 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3894 Lja-Chr4 71609714 71614899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3894 3 621 Calmodulin-binding Proteins AT5G57580 62.090 0.0 762
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3894 - - gmx:100812605 1075.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3894 4 71609714 71614899 Lja6g3133 6 59970879 59976634 PCT