Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3858 ATGGAAGGCTTTGATACAGGTACAGACACCACGTACACAGTTCTAGAGTGGGCAATGGCAGAACTGTTAAAGCATCCAGATGTGATGCATAAATTGCAAGATGAGGTGAGAAATGTGGTTGGAAACAGAACTCATGTAACTGAAGAGGATTTGAGTGACATGAACTACTTGAAGGCTGCGATTAAAGAAACCCTTCGCCTCCACCCGCCGGCTCCCTTATTAGTTCCTAGAAGATGCACTAAAGACACCACCAAACAGAATGGTTATGTCATTGCTGCTGGCACACATGTATTAGTGAATGCTTGGGGAATTGCAAGAGACCCTTTATGTTGGGACCAACCTCTGGAGTTTAAACCAGAAAGGTTCCTCAGCAGTGGCATAGATTTCAAAGGACATGATTTTCAGTTTGTCCCGTTCGGAGCAGGAAGGAGAGGTTGCCCTGGACAGCTATTTGCTATTGCTGTGGATGAGCTGGTGCTAGCAAACCTAGTCTTCCAATTTGATTGGAAATTGCCTGCTGGGGAGGAGGATTTGGACATGACTGAAACTAATGGCCTTACAAGCCATAGGAAATATCCCCTAATGGCAGTTCCTACCAAATACATATGA 609 0.4499 MEGFDTGTDTTYTVLEWAMAELLKHPDVMHKLQDEVRNVVGNRTHVTEEDLSDMNYLKAAIKETLRLHPPAPLLVPRRCTKDTTKQNGYVIAAGTHVLVNAWGIARDPLCWDQPLEFKPERFLSSGIDFKGHDFQFVPFGAGRRGCPGQLFAIAVDELVLANLVFQFDWKLPAGEEDLDMTETNGLTSHRKYPLMAVPTKYI* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3858 202 PRINTS E-class P450 group I signature 100 124 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3858 202 PRINTS E-class P450 group I signature 136 146 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3858 202 PRINTS E-class P450 group I signature 58 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3858 202 PRINTS E-class P450 group I signature 146 169 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3858 202 PRINTS E-class P450 group I signature 15 41 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3858 202 PANTHER CYTOCHROME P450 71B11-RELATED 4 200 - -
Lja4g3858 202 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 139 148 IPR017972 GO:0005506|GO:0016705
Lja4g3858 202 Gene3D Cytochrome P450 4 197 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3858 202 PRINTS P450 superfamily signature 6 23 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3858 202 PRINTS P450 superfamily signature 59 70 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3858 202 PRINTS P450 superfamily signature 137 146 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3858 202 Pfam Cytochrome P450 7 191 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3858 202 SUPERFAMILY Cytochrome P450 6 199 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3858 202 PANTHER CYTOCHROME P450 FAMILY PROTEIN 4 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3858 Lja-Chr4 71197046 71198154 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3858 1 200 Cytochrome P450 AT1G33720 50.000 3.11e-68 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3858 - - gmx:100819183 298.901