Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3795 ATGGCTTTGGATATTCTCCTCTCATGGTCAACAACCCAGCCATTTACAATCCCAGCCACATTGTTGTTTTTCTTTTTCCTTCTTTTCTGGTCACTCAAGAAAAGAAGTCATACTAACACACCGCCACCGGAAGCTAGCGGTGCATGGCCTCTGATCGGCCACCTCCCCCTCTTAGGTGGCTCCCAACCACCTCACATCACGCTAGGTAACATAGCTGATAAATATGGACCCATCTTCACCTTGCGTTTAGGTGTTCACCGCACTCTTGTTGTGAGCAACTGGGAAATGGCCAAAGAGTGTTTCACTGTAAACGACAAAGCGTTTGCTACTCGTCCCAAAACTTTAGCCAATGAAATTGTGGCTAAAAACTTCTTTGGTTTCGTACCCTACGGTTCATATTGGCGTGACGTGAAAAAGATAGCCACAGTGGAGGTTCTTTCCGCCAAACGCACGGAGATGCTGAAGCATGTGATGGAATCGGAGGTGAAGGCAGCAATGAAAGATAGCTATGATTCTTGGGAAAAGATGAAGGAGAGTGGTACTGAAAAAGTGGTGGTTACTGAGATGGAGAAATGGTTTGCGGACATAACACTGAATGTGGTGTTCAGAACGGTGTTAGGAAAACGCTTAGTTGAAAGAATGGGTAGTGATGGGAATGAGGAAGAGAACAAAAAGATTCGGGGGATAGTTAGGGAATTCTTTCGTCTCATGGGGTTATTCACTGTTTCTGATGCTCTACCATATTTAAGATGGTTGGATTTGGATGGTGAGGAGAATAAAATGAAAAAAACATCTAAAGAATTAGATGACTTTGCTACGGTTTGGCTTGAGCAACACAAACAAAAGAGAAAGAATAATGGTTCAGGGGAATGGAAAAAGGGTGAATATGACTTTATGGATGTGTTTCTATCCATCGTTGATGATGAAGGTTTCCATGGTCATGATGGTGATTCCATAATAAAAGCGACATGTCTGCAACTAATTGTGGCCGGCACTGACACTACGACGTCAACATTAACTTGGGCTCTCTCTTTACTTCTCAACAATCGTGAAGCCTTAAAGAAGGCAACACATGAGTTAGACACACAAATGGGAGGAAGAACTAAGATAATGGAATCAGACTTTGAGAAATTGGTGTATCTTCAAGCCATTATTAAGGAAACATTGCGCTTATACCCAGTCGCACCATTAAATGTGACTCACATGTCTATGGAAGATTGTGTTGTGGGTGGATACCATGTGCCCGCTGGCACATCTCTCGTGACTAACATTTCAAAAATTCAACGGGATCCTTCAATATATTCTGATCCAATGGAGTTTCGTCCAGAGAGATACCTCACAACCCATAAAGACCTTGATATGAAGGGAAAAAATTTTGAGCTCATTCCATTTGGTGCAGGCAGAAGAATATGTCCTGGAATCTCTTACGCTCTTCAACTGATTCAAATGACACTTGCTACATTATTGCATGGGTTTGATATAGTGACTGTTGATGGAGGACCAGTTGATATGGTTGAAGTGTCCGGGTTAACCAACAGCAAAGCTTCTCCACTCAAAGTCATTCTTACACCACGCCAATCTACCCAAGTTTACACTCAAAATTGA 1605 0.4249 MALDILLSWSTTQPFTIPATLLFFFFLLFWSLKKRSHTNTPPPEASGAWPLIGHLPLLGGSQPPHITLGNIADKYGPIFTLRLGVHRTLVVSNWEMAKECFTVNDKAFATRPKTLANEIVAKNFFGFVPYGSYWRDVKKIATVEVLSAKRTEMLKHVMESEVKAAMKDSYDSWEKMKESGTEKVVVTEMEKWFADITLNVVFRTVLGKRLVERMGSDGNEEENKKIRGIVREFFRLMGLFTVSDALPYLRWLDLDGEENKMKKTSKELDDFATVWLEQHKQKRKNNGSGEWKKGEYDFMDVFLSIVDDEGFHGHDGDSIIKATCLQLIVAGTDTTTSTLTWALSLLLNNREALKKATHELDTQMGGRTKIMESDFEKLVYLQAIIKETLRLYPVAPLNVTHMSMEDCVVGGYHVPAGTSLVTNISKIQRDPSIYSDPMEFRPERYLTTHKDLDMKGKNFELIPFGAGRRICPGISYALQLIQMTLATLLHGFDIVTVDGGPVDMVEVSGLTNSKASPLKVILTPRQSTQVYTQN* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3795 534 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 464 473 IPR017972 GO:0005506|GO:0016705
Lja4g3795 534 PRINTS P450 superfamily signature 383 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3795 534 PRINTS P450 superfamily signature 330 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3795 534 PRINTS P450 superfamily signature 462 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3795 534 PANTHER CYTOCHROME P450 41 531 - -
Lja4g3795 534 Pfam Cytochrome P450 45 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3795 534 PRINTS E-class P450 group I signature 471 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3795 534 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3795 534 PRINTS E-class P450 group I signature 461 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3795 534 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3795 534 PRINTS E-class P450 group I signature 339 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3795 534 PRINTS E-class P450 group I signature 382 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3795 534 PRINTS E-class P450 group I signature 423 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3795 534 PRINTS E-class P450 group I signature 319 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3795 534 PRINTS E-class P450 group I signature 196 214 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3795 534 Gene3D Cytochrome P450 31 531 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3795 534 PANTHER CYTOCHROME P450 82C3-RELATED 41 531 - -
Lja4g3795 534 SUPERFAMILY Cytochrome P450 47 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3795 Lja-Chr4 70387881 70393258 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3795 21 532 Cytochrome P450 AT4G31940 49.712 5.52e-175 502
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3795 - - gmx:100778017 662.529