Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3794 ATGGGTTTCAATACTCTCCTCTCACAGTCAATGGAGATATACACAATCTATGCCACGCTGTTCTTTCTCTTTTGCCTTCTTTTTTGGATACTGAAGAGAAGCCATGCTGACATAACCACAAAGGCACCACCGCCACCAGAAGCTGAGGGTGCATGGCCTTTGATCGGCCACCTCCACCTCTTAGGTGGATCTCACGCAGCACATGTCATCTTGGGTAACATGGCCGACAAATACGGACCCATATTCACCTTTCGTTTAGGTGTTCATCGAACTTTGGTGGTTAGCAACTGGAAAATGGCAAAAGAGTGTTTAACCGTAAACGACAAAGTGTTTGCTTCCCGTCCCAACTCTTTAGCCAATGAAATTTTGGGCTTCAACTTCTCATTGTTTGGTACCAGCCCCTACGGCCCCTATTGGCGCTACGTCCTATCCACAAAACGCATAGAAATGCTCAAGCAAGTGATGCACTCGGAGGTGAAGGCAGCAATGAAAAAAAGCTATGATTATTGGATAATGATGAAGGAGAGTGGTGATAAAAAACCGGTCACTGAATTGGAGAAATGGTTTGCAAACATAGCACTAAACGTTTATGAAGAGAACGAAAAGATTAGGAAAGCAATTAGAGATTTCTTCCATCTCTTTGGGCAGTTCACTGTTTCTGATGCGGTGCCGTTTTTGAGATGGTTGGATTTGGATGGACTTGAGAGGAAAATGAAGAAGTTAGCCAAAGAATTGGATGACTACGCTCAGGTTTGGCTTGAGCAACACAAACGCAACAGAAATAGTGATTCAAGCGAATTGAAAAAGGGTGAACATGACTTCATGGACTTGCTTCTTTCCACCGTTGATGATGAGTGCCTACAGTACGGTCATGATGCTGATACCATAGTAAAATCTACATGTCTGCAATTAATTTTAGCTGGCACAGACACTATGACAGGGACATTAACTTGGGCTCTCTCCTTACTTCTCAACAACCGTGAAGTCCTAAATAAGGCTACACATGAGTTAGACACACAAATTAGTAGGGAAAATGTGGTAGTGGAATCAGACTTCGAGAAGTTGGAGTATCTACAAGCCATCATTAAGGAAACATTACGCCTATACCCAGCAGGACCATTAAGTGTGCCTCATGAGTCCATGGAAGATTGTATCGTGGGTGGATACCATGTTCCTGCTCACACGCATCTCTTGACTAATATTTCAAAACTTCAACAAGATCCTTCACTGTATTCTGATCCATTGGAGTTTCGCCCGGAGAGATTCCTCACAACCCATAAGGACATTGATCATAAGGGAAAACATTTTGAGTTCATCCCATTTGGTGCAGGTAGAAGAATATGTCCTGGAATCTCTTTCGCTCTTCAGCTAATGCAAATGACACTTGCTACTCTATTGCATGGATTTGAAATAGTAACTATTGATGGAGGACCTGTGGATATGGTTGAAAAAACCGGGTTAACCAACGTTAAAGCTTCTCCACTCCAAGTCATTCTTACACCACGTCAATCCAACCAAGTTTACAATCAAAATTAA 1536 0.4258 MGFNTLLSQSMEIYTIYATLFFLFCLLFWILKRSHADITTKAPPPPEAEGAWPLIGHLHLLGGSHAAHVILGNMADKYGPIFTFRLGVHRTLVVSNWKMAKECLTVNDKVFASRPNSLANEILGFNFSLFGTSPYGPYWRYVLSTKRIEMLKQVMHSEVKAAMKKSYDYWIMMKESGDKKPVTELEKWFANIALNVYEENEKIRKAIRDFFHLFGQFTVSDAVPFLRWLDLDGLERKMKKLAKELDDYAQVWLEQHKRNRNSDSSELKKGEHDFMDLLLSTVDDECLQYGHDADTIVKSTCLQLILAGTDTMTGTLTWALSLLLNNREVLNKATHELDTQISRENVVVESDFEKLEYLQAIIKETLRLYPAGPLSVPHESMEDCIVGGYHVPAHTHLLTNISKLQQDPSLYSDPLEFRPERFLTTHKDIDHKGKHFEFIPFGAGRRICPGISFALQLMQMTLATLLHGFEIVTIDGGPVDMVEKTGLTNVKASPLQVILTPRQSNQVYNQN* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3794 511 PANTHER CYTOCHROME P450 45 508 - -
Lja4g3794 511 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3794 511 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3794 511 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3794 511 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3794 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Lja4g3794 511 Pfam Cytochrome P450 47 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3794 511 SUPERFAMILY Cytochrome P450 46 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3794 511 PANTHER CYTOCHROME P450 82C3-RELATED 45 508 - -
Lja4g3794 511 Coils Coil 231 251 - -
Lja4g3794 511 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3794 511 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3794 511 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3794 511 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3794 511 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3794 511 PRINTS E-class P450 group I signature 99 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3794 511 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3794 511 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3794 511 Gene3D Cytochrome P450 30 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3794 Lja-Chr4 70355005 70357357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3794 20 508 Cytochrome P450 AT4G31940 45.298 3.02e-154 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3794 - - gmx:100778017 644.81