Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3792 ATGGATCTTCCCTCACATTCGACAGTTACATTCACAATCTATGCCACTCTTTTCTCACTCTTCCTTTGCATTCTTTTTTGGGTAAAGGACAAACGCCGCACTGTAAACACACCACCACCACCACCGGAAGCCAGCGGCGCCTGGCCTTTAATCGGTCACCTCCACCTTTTAGCTGGCTCCCAACCAGCTCACACCACCTTGGGTAACATGACTGACAAATACGGACCTATCTTCACCTTGCGTTTAGGCGTTCACCGAACTTTAGTTGTAAGCAACTCAAAAATGGCTAAAGAGTGCTTTACCGTTAACGACAAAGCATTTGCTTCCCGTCCCAAAACTTTAGCTACTGAAATTTTGGGCTTAAACTTTTCCATGTTTGCTTTCATACCCTACGGTTCCTATTGGCGCCACGTGCGTAAGATAGCAACCTTGGAGGTCCTCACCACCAAACGCATAGAGATACTTAAGCATGTGATGGAATCGGAGATTAAAGCAGCTATGAAAGAGAGTTACAATTTTTGGGTAAAGATGAAGGAGAGTGGTGATATTGATAATGATCAAAAGGCTATTCCTATTACTGAGATGAAGAAGTGGTTTGGTGATATAACACTCAACATCATGTTTAGAACGGTGATAGGAAAACGTTTAGTTGGGGTTGGTTGTGATGGTGAAGTAGTGGAAGAAAATGAAAGGATACGAAAAGCAGTTAAGGACTTTTTCCATCTCAGTGGTTTGTTCCCTGTGTCTGATGCGATTCCGTTTTTGAGATGGTTGGATTTGGATGGAGCAGAGAAGAAGATGAAGAAGACAGCCAAAGAGTTAGATGATTTTGCTCAGGTTTGGCTTGAGCAACACAAACGCAATAGAGACATTGGTTCAGGGGAATGGGATGAGGGTAAGCATGACTTCATGGATGTGCTTATTTCCACCGTTGATGATGAAGGTTTTGATGGTCATGATGCCGATACCATAATCAAAGCTACATCTCTGTCATTAATTTTGGCTGCTGCAGACACTACAACAGCGACATTAACTTGGAGTCTCTCTTTACTTCTCAATAATCGTGAAATCTTAAAGAAGGTTATACATGAGTTAGACACACAAATTGGTAAAGAAAATTTGGTTGTGGAATCAAATTTGGAGAAGTTGGAGTATCTCCAAGCCGTTATCAAAGAAACATTGCGCTTATATCCACCCGGACCACTTGGTGTGCCTCACGAGTCCATGGAAGATTGTATTGTCGGTGGATACCATGTTCCTGCTCAAACACGTCTTTTGACTAACATTTCAAAACTTCAACGAGATCCCTTTCTATATTCCAATCCCTTTGAGTTTCACCCAGAGAGATTTCTCACAACCTATAAAGAGGTTGATCTTAAGGGCCAACATTTTGAATTGATTCCATTTGGCGCAGGTAGAAGAATGTGTCCTGCAATGTCATTTGCTCTTAAACTAATGCAGATGACACTTGCTACTCTATTACATGGGTTTGAAATAATGACGGTTGATGGTGGACCAGTTGATATGGTTGAAGAAAGTGGATTAAGCAACATAAGAGCTTCCCCGCTCCAAGTCATTCTTACACCACGCCTATTTTCCCAAGTTCATGATCAAAATTGA 1620 0.4191 MDLPSHSTVTFTIYATLFSLFLCILFWVKDKRRTVNTPPPPPEASGAWPLIGHLHLLAGSQPAHTTLGNMTDKYGPIFTLRLGVHRTLVVSNSKMAKECFTVNDKAFASRPKTLATEILGLNFSMFAFIPYGSYWRHVRKIATLEVLTTKRIEILKHVMESEIKAAMKESYNFWVKMKESGDIDNDQKAIPITEMKKWFGDITLNIMFRTVIGKRLVGVGCDGEVVEENERIRKAVKDFFHLSGLFPVSDAIPFLRWLDLDGAEKKMKKTAKELDDFAQVWLEQHKRNRDIGSGEWDEGKHDFMDVLISTVDDEGFDGHDADTIIKATSLSLILAAADTTTATLTWSLSLLLNNREILKKVIHELDTQIGKENLVVESNLEKLEYLQAVIKETLRLYPPGPLGVPHESMEDCIVGGYHVPAQTRLLTNISKLQRDPFLYSNPFEFHPERFLTTYKEVDLKGQHFELIPFGAGRRMCPAMSFALKLMQMTLATLLHGFEIMTVDGGPVDMVEESGLSNIRASPLQVILTPRLFSQVHDQN* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3792 539 Coils Coil 260 280 - -
Lja4g3792 539 PANTHER CYTOCHROME P450 82C3-RELATED 41 535 - -
Lja4g3792 539 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 469 478 IPR017972 GO:0005506|GO:0016705
Lja4g3792 539 Pfam Cytochrome P450 44 515 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3792 539 SUPERFAMILY Cytochrome P450 42 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3792 539 PRINTS P450 superfamily signature 335 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3792 539 PRINTS P450 superfamily signature 388 399 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3792 539 PRINTS P450 superfamily signature 467 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3792 539 PANTHER CYTOCHROME P450 41 535 - -
Lja4g3792 539 Gene3D Cytochrome P450 26 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3792 539 PRINTS E-class P450 group I signature 476 499 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3792 539 PRINTS E-class P450 group I signature 466 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3792 539 PRINTS E-class P450 group I signature 387 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3792 539 PRINTS E-class P450 group I signature 428 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3792 539 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3792 539 PRINTS E-class P450 group I signature 344 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3792 539 PRINTS E-class P450 group I signature 324 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3792 539 PRINTS E-class P450 group I signature 95 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3792 Lja-Chr4 70294754 70296523 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3792 16 531 Cytochrome P450 AT4G31940 47.628 5.52e-170 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3792 - - gmx:100778017 687.567