Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3787 ATGGAGTCGCGAGTGTTGTCACGCGCCACCGCCCTCCCTCACCTCCGCAGGCTACCGCGTGAGTCCGTCTCCAGTAATGCCTCCCTCGTCTCCGTCAGAGCGATCGGGTCCGTTGCCGACGGCGGGAACCTCATCTGGGGGAGGCAGCTGCGTCCAGAGCTTTGCTCACCGGCGCTAAAGAAGGATGCTGTTCTGCTCCGTCCTTGCCTCGCCGCCGCCTCCTCGCCGGCTGGTGGTAGCGATTCCGCCGGGGAAGCGAAGGTTGCTCCGGTTGGGTTCTTTGCGAAGTACCCGGCTCTTGTCACCGGATTTTTCTTCTTCACATGGTACTTCTTGAATGTGATTTTCAACATCCTCAACAAGAAGATCTACAATTACTTTCCCTATCCTTACTTTGTGTCGGTTATCCATTTGTTTGTGGGTGTGGTGTACTGTTTGGTGAGCTGGACCGTGGGCCTCCCTAAGCGCGCGCCTATAGACTCCAACCAGCTGAAATTGCTCATTCCTGTGGCTGTGTGTCATGCACTAGGCCATGTCACCAGCAATGTCTCGTTTGCCGCAGTTGCTGTTTCTTTCACACATACTGTTAAAGCTCTTGAGCCATTCTTCAATGCTGCTGCTTCACAGTTCATACTTGGCCAATCAATTCCCATCACTTTATGGCTGTCACTTGCTCCTGTTGTTATTGGTGTGTCAATGGCATCATTGACGGAGCTCTCATTCAACTGGCTCGGCTTCATAAGTGCTATGATTTCAAACATTTCCTTCACATACCGGAGCATCTACTCAAAGAAAGCCATGACTGATATGGATAGCACCAATCTCTATGCTTACATCTCCATCATTGCTCTAATTGTCTGCCTACCACCGGCCATAATTCTGGAAGGGCCTGTACTGTTGAAGCATGGCTTCAATGATGCAATTGCCAAAGTAGGTCTTGTCAAGTTCGTCACAGATCTCTTCTGGGTTGGGATGTTTTACCACCTCTACAACCAGGTGGCCACCAACACACTGGAGAGAGTGGCTCCTCTCACTCATGCAGTTGGCAACGTACTGAAACGTGTATTTGTGATTGGATTTTCAATTATTATCTTCGGTAACAGGATTTCCACCCAAACTGGTATTGGAACAGCAATTGCAATTGCTGGAGTGGCAATCTACTCGCTTATCAAAGCCAGGATCGAGGAAGAGAAGCGACAAGCGAAAGCAGCATAA 1215 0.5012 MESRVLSRATALPHLRRLPRESVSSNASLVSVRAIGSVADGGNLIWGRQLRPELCSPALKKDAVLLRPCLAAASSPAGGSDSAGEAKVAPVGFFAKYPALVTGFFFFTWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLVSWTVGLPKRAPIDSNQLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTVKALEPFFNAAASQFILGQSIPITLWLSLAPVVIGVSMASLTELSFNWLGFISAMISNISFTYRSIYSKKAMTDMDSTNLYAYISIIALIVCLPPAIILEGPVLLKHGFNDAIAKVGLVKFVTDLFWVGMFYHLYNQVATNTLERVAPLTHAVGNVLKRVFVIGFSIIIFGNRISTQTGIGTAIAIAGVAIYSLIKARIEEEKRQAKAA* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3787 404 Pfam Triose-phosphate Transporter family 101 388 IPR004853 -
Lja4g3787 404 PANTHER SOLUTE CARRIER FAMILY 35 30 396 - -
Lja4g3787 404 PANTHER BNAC02G47130D PROTEIN 30 396 - -
Lja4g3787 404 SUPERFAMILY Multidrug resistance efflux transporter EmrE 318 389 - -
Lja4g3787 404 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 100 398 IPR004696 GO:0016021|GO:0022857|GO:0055085
Lja4g3787 404 SUPERFAMILY Multidrug resistance efflux transporter EmrE 143 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3787 Lja-Chr4 70200313 70205583 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3787 1 402 Antiporters AT5G46110 78.261 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3787 K15283 - gmx:732611 709.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3787 4 70200313 70205583 Lja4g3787 4 70200313 70205583 ECH