Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3786 ATGTTTTTGAAGGTCCATTCATTAGTTGATGTTGCAGGTGGAACTGGAAACACATGTAAGATCATTTGTGAGGCATTTCCACAATTAAAATGCATTGTCTTGGACCTTCCACAGGTTGTCACAGACTTAACAGGAACCAACAATTTGAGCTTTGTTGGTGGGAACATGTTTGAATCTATCCCTAAAGCTGATGCAGTTTTACTCAAGTGGGTGTTACACAATTGGTGTGACGATGATTGCATAAAGATACTCAACAATTGTAAAGATGTTATTTCAGGCGAAGGCAAAAGAGGAAAATTGATCATCATAGACTCGGTGACAAATGAAAAGCAAGATGACCCTGAATTGACTGAAGTACAACTTTTGATGTTGTTTGATGACCCGAGGTTTATTCTATCTTTGTCGAGTCTTTCTTGTTTCTTTCTTTTCCTTTTTGAGTCATTTATTGAGTTTTTGAGTCAAGTTGAGTCCCTTTTTAATTCATATTTGCATCTGCATTAG 501 0.3673 MFLKVHSLVDVAGGTGNTCKIICEAFPQLKCIVLDLPQVVTDLTGTNNLSFVGGNMFESIPKADAVLLKWVLHNWCDDDCIKILNNCKDVISGEGKRGKLIIIDSVTNEKQDDPELTEVQLLMLFDDPRFILSLSSLSCFFLFLFESFIEFLSQVESLFNSYLHLH* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3786 166 Pfam O-methyltransferase domain 3 125 IPR001077 GO:0008171
Lja4g3786 166 Gene3D Vaccinia Virus protein VP39 1 127 IPR029063 -
Lja4g3786 166 PANTHER O-METHYLTRANSFERASE 4 123 IPR016461 GO:0008168
Lja4g3786 166 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 3 123 IPR029063 -
Lja4g3786 166 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 4 123 - -
Lja4g3786 166 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 166 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3786 Lja-Chr4 70190172 70192402 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3786 2 128 Monolignol Biosynthesis Gene Families AT5G54160 38.168 3.80e-26 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3786 - K22588 gmx:100819853 179.489