Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3783 ATGAACAACCAACTCCAATTCCAATTCCAATTCCAATTCCAATTCCAATTCCAATTCCTCCTCTACATCACACTCCTCACCAACGTCGTCGTTTCACTCAACCAAGAAGGCCTCTACCTCTACCAATTCAAACTCACCCTCGACGACCCAGACTCCAAACTCACCTCATGGAACCCACGTGACACCACCCCTTGCAACACCCTCACCCCTTGGTACGGCGTCATTTGCGACTCCGCCACCAACTCCACCGTCACCGCCCTCGACCTCTCCGACACCAACATCGCCGGCCCATTCACCGCCTCCATCCTCTGCCGCCTCCCCAACCTCACCTCCATCAACCTCTTCAACAACTCCATCAACCAAACACTCCCCCCTCACCAAATCACCCTCTGCAAAAGCCTCACCCACCTCGACCTCTCTCAGAATCTCCTCACCGGAACTCTCCCGGAGACTCTCCCCCTCCTCCCCAACCTCCGCTACCTCGACCTCACCGGTAACAACTTCTCCGGCGTCATCCCTCCCTCCTTCGGAACATTCCAGAGCCTCGAGATTCTCTCCTTGGTTTCCAACCTTCTAGAAGGTACCATTCCTCCTTCACTCGGCACGTTAACCACCTTGAAAATGCTGAACCTCTCTTACAACCCGTTTTACCCGGGTCGGATCCCGCCGGAGATTGGCAACCTCACCAACCTCGAGGTGCTCTGGCTAACCCAGTGCAACCTTGTCGGCGTTATTCCTGATTCAATCGGGAACTTGAAGAAGCTCAAGGACTTGGACCTTGCGCTGAACGATTTGTACGGTTCTATACCGAGTTCGCTCACTGGGTTAACCAGCTTGCGGCAGATTGAGCTCTATAACAACTCGCTCTCCGGCGAGTTGCCGAGGGGGATGGGGAACCTCACTGAGCTGAGGCTGCTCGACGCGTCGATGAACCATTTGACAGGGAGGATACCGGAGGAGCTTTGTTCGTTGCCGCTGGAGAGCTTGAATCTGTATGAGAATCGGTTCGAGGGCGAGTTGCCGGCGAGTATAGCTGACTCGCCGAATCTCTACGAGTTGAGGTTGTTTGGGAATCGGTTAACCGGGAAGTTGCCGGCGAATCTCGGGAAGCGGGGTCCTCTGAGGTGGCTTGACGTTTCGAGCAACCAGTTCTGGGGGCCAATTCCGGCGAGTTTGTGTGATCTCGGGGAGCTGGAGGAGCTTCTGATGATATATAATTTGTTCTCCGGTGAGGTTCCGGCGAGCCTCGGCACGTGTCAGAGTTTAACGCGGGTCCGGCTCGGTTTCAACCGATTCTCCGGCGAGGTTCCGGCGGGGATCTGGGGTTTGCCGCATGTGTACCTTCTCGAGCTAGCTCACAACTCGTTTTCCGGTCCCATTGCGAGGACCATTGCCGGAGCGGGGAACCTGTCGTTGTTGATTCTAACGAAGAACAATTTCTCGGGAACGGTTCCTTATGAGATTGGGTGGCTGGAAAATCTGGTGGAGTTTTCTGGCGGTGATAACATGTTCAGTGGCGCGCTACCCGATAGCATTGCGAATCTTGGGCAGCTTGGGATTCTTGATTTTCACAACAATAGGCTCTCTGGGGAGCTTCCAAAGGGGATTGGGTCTTTGAAGAAGCTCAATGATTTGAATTTGGCAAACAATGAGATTGGTGGGAAGATTCCTGATGAGATTGGGAGCTTGTCTGTGTTGAATTTTCTTGATCTTTCTAGGAATCATTTTTCAGGGAAAGTCCCTCATGGGTTGCAGAATCTGAAGTTGAATCAGTTCAATTTGTCTTATAATCATCTTTCTGGGGAGCTTCCACCTCAGTTGGCTAAGGAAATGTACAGGACTAGTTTCCTGGGTAATCCTGGGTTGTGTGGGGATTTGAAAGGTTTGTGTGATGGCAGGAGCCAAGTGAAAAGTGCAGGTTATGTTTGGCTTCTTCGAGCGATCTTCATGGTTGCCATATTGGTGTTCCTCGTCGGTGTGGTCTGGTTCTACTTCAAGTATAAGAATTTCAAGGATGCGAAGAGGGCTATTGATAAGTCCAAATGGACGTTGATGTCGTTTCATAAACTGGGTTTTGGTGAGGATGAGATCTTGAATTGCCTCGATGAAGATAATGTGATTGGAAGTGGTTCATCGGGGAAGGTCTATAAGGTTGTGCTTAGCAGCGGGGAGGCTGTTGCGGTGAAGAAGATATGGGGAGGGGTCAAGAAGGAAGCGGACAGTGGGGATCTCGAGAAGGGTAGGGTTCATGACAATGCTTTCGATGCAGAAGTTGAAACTTTGGGGAAAATCAGGCACAAGAACATTGTCAAGCTTTGGTGTTGCTGTACCACTAGGGACTGCAAGCTCTTGGTGTATGAGTATATGCCCAATGGCAGTCTTGGTGACTTGCTTCATAGCAGTAAAGGGGGGTTGTTGGATTGGCCAACAAGATACAATATAGCTGTTGATGCTGCTGAAGGCCTCTCTTATCTGCATCATGATTGTGTTCCGGCAATTGTTCATAGAGATATAAAGTCTAACAATATCTTGCTGGACGGGGACTTTGGTGCAAGGGTAGCAGATTTTGGAGTAGCTAAGGCGGTCGAAACCACGGCAAAAGGAACTAAATCCATGTCTGTCATAGCTGGCTCTTGTGGGTATATTGCACCAGAGTATGCATACACGCTTAGAGTAAATGAGAAGAGTGACATATACAGTTTCGGTGTTGTGATACTTGAGTTGGTATCCGGAAGACGCCCTGTCGATCCGGAATTTGGGGAGAAAGACTTGGTTAAGTGGGCTTGCACTACCTTGGATCAGAAAGGGATTGATCATGTACTTGATTCCAGGCTTGATTCTTGTTTCAAAGATGAAATTAGCAAAGTCTTCAACATTGGCCTCATGTGCACTAGTCCTCTTCCAATCAATAGGCCTTCAATGAGAAGAGTGGTGAAGATGTTGCAAGAGGTAGGAGCAGAGAGCCACACGAAGCCTGCGAAGAAAGACGGCAAATTAACCCCTTATTACTATGAGGATGCCTCAGATCATGGAAGTGTTGCTTAA 3045 0.4995 MNNQLQFQFQFQFQFQFQFLLYITLLTNVVVSLNQEGLYLYQFKLTLDDPDSKLTSWNPRDTTPCNTLTPWYGVICDSATNSTVTALDLSDTNIAGPFTASILCRLPNLTSINLFNNSINQTLPPHQITLCKSLTHLDLSQNLLTGTLPETLPLLPNLRYLDLTGNNFSGVIPPSFGTFQSLEILSLVSNLLEGTIPPSLGTLTTLKMLNLSYNPFYPGRIPPEIGNLTNLEVLWLTQCNLVGVIPDSIGNLKKLKDLDLALNDLYGSIPSSLTGLTSLRQIELYNNSLSGELPRGMGNLTELRLLDASMNHLTGRIPEELCSLPLESLNLYENRFEGELPASIADSPNLYELRLFGNRLTGKLPANLGKRGPLRWLDVSSNQFWGPIPASLCDLGELEELLMIYNLFSGEVPASLGTCQSLTRVRLGFNRFSGEVPAGIWGLPHVYLLELAHNSFSGPIARTIAGAGNLSLLILTKNNFSGTVPYEIGWLENLVEFSGGDNMFSGALPDSIANLGQLGILDFHNNRLSGELPKGIGSLKKLNDLNLANNEIGGKIPDEIGSLSVLNFLDLSRNHFSGKVPHGLQNLKLNQFNLSYNHLSGELPPQLAKEMYRTSFLGNPGLCGDLKGLCDGRSQVKSAGYVWLLRAIFMVAILVFLVGVVWFYFKYKNFKDAKRAIDKSKWTLMSFHKLGFGEDEILNCLDEDNVIGSGSSGKVYKVVLSSGEAVAVKKIWGGVKKEADSGDLEKGRVHDNAFDAEVETLGKIRHKNIVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSSKGGLLDWPTRYNIAVDAAEGLSYLHHDCVPAIVHRDIKSNNILLDGDFGARVADFGVAKAVETTAKGTKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVSGRRPVDPEFGEKDLVKWACTTLDQKGIDHVLDSRLDSCFKDEISKVFNIGLMCTSPLPINRPSMRRVVKMLQEVGAESHTKPAKKDGKLTPYYYEDASDHGSVA* 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3783 1014 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 19 995 - -
Lja4g3783 1014 PANTHER LRR RECEPTOR-LIKE KINASE 19 995 - -
Lja4g3783 1014 Gene3D Phosphorylase Kinase; domain 1 685 788 - -
Lja4g3783 1014 Pfam Protein kinase domain 703 924 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g3783 1014 Gene3D Ribonuclease Inhibitor 32 217 IPR032675 -
Lja4g3783 1014 Pfam Leucine rich repeat 230 289 IPR001611 GO:0005515
Lja4g3783 1014 Pfam Leucine rich repeat 156 215 IPR001611 GO:0005515
Lja4g3783 1014 SMART serkin_6 701 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g3783 1014 SUPERFAMILY Protein kinase-like (PK-like) 697 981 IPR011009 -
Lja4g3783 1014 Gene3D Ribonuclease Inhibitor 326 632 IPR032675 -
Lja4g3783 1014 ProSitePatterns Protein kinases ATP-binding region signature. 707 730 IPR017441 GO:0005524
Lja4g3783 1014 Pfam Leucine rich repeat N-terminal domain 34 77 IPR013210 -
Lja4g3783 1014 Gene3D Ribonuclease Inhibitor 218 325 IPR032675 -
Lja4g3783 1014 ProSiteProfiles Protein kinase domain profile. 701 984 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g3783 1014 SUPERFAMILY RNI-like 87 434 - -
Lja4g3783 1014 Gene3D Transferase(Phosphotransferase) domain 1 789 1006 - -
Lja4g3783 1014 ProSitePatterns Serine/Threonine protein kinases active-site signature. 833 845 IPR008271 GO:0004672|GO:0006468
Lja4g3783 1014 SUPERFAMILY L domain-like 374 623 - -
Lja4g3783 1014 SMART LRR_typ_2 155 178 IPR003591 -
Lja4g3783 1014 SMART LRR_typ_2 276 299 IPR003591 -
Lja4g3783 1014 SMART LRR_typ_2 563 586 IPR003591 -
Lja4g3783 1014 SMART LRR_typ_2 106 130 IPR003591 -
Lja4g3783 1014 SMART LRR_typ_2 515 539 IPR003591 -
Lja4g3783 1014 SMART LRR_typ_2 300 324 IPR003591 -
Lja4g3783 1014 SMART LRR_typ_2 228 252 IPR003591 -
Lja4g3783 1014 SMART LRR_typ_2 179 203 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3783 Lja-Chr4 70126315 70130386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3783 29 1014 Receptor kinase-like Gene Family AT1G28440 70.594 0.0 1410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lja4g3783 Pkinase 3.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3783 - - gmx:100819887 1691.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3783 4 70126315 70130386 Lja4g3783 4 70126315 70130386 ECH
Lja6g3015 6 58959169 58962879 Lja4g3783 4 70126315 70130386 ECH