Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3782 ATGAAACATGGCTATATTGCTTATGATTTGGTCATGGTTGCTCTATCCATATCTCTCATCGTTCTTGGTGTTATCCTCTTTCTTGTTTGCAAGAAGAAACCAGTTGATGAATCTGAAGAAACTCTTCCTATTAAGAGTAGCGCCCAGGCATACTCATTGATGGACATTGATGCTGCCACAGATGGCTTCAACCATAGGAGAATCATTGGCAAGGGTCGCTTAGGAACAGTGTATGCTGGTCTTCATGAAAAAGGAGAACTTGTAGCTGTGAAAAGAATTCATCCAGTGCTTGTCCTGAGCAATGCGGGATTCGGGTTCTCATCGGTGCTAAAATGGCTATCTTCAGCTCAACACCCCAACATAGTTCCTATAATAGGATTCTCAGAAGCACCGGGTGAGAGAATTATAGTGAGGGAGCTTGTGAGAATGGCAAGCTTGGAATTCTACTTGCATCAGAATTTTAATGGAGCTTCACTTTTGGATTGGAACAAGAGGATTAAAATTGGTGCTGGAGCAGCTAGAGGGCTTCATTATTTACATGAAGTGGCAACACCAAACATTGTGCATGGGTGTGTCAAGTCTTCAAATGTTCTAATTGATGCTAATTTTTGTCCTAGAGTTTCTGGTTTTGGTCTCAACTTTTTGGCACCAATGGAAAAGAGAGGGCTAGTGGGTTATGTGGATGGTGAGTATTGGAATGGAAGAGGGGGTGGTGGTGCTAGCAAGGAAAGTGATGTTTATGGGTTAGGGGTGGTTTTGTTGGAGTTGTTAAGTGGTAGAGGGTGTGATGAAGGATTGTTGGTAAAATGGGCATTGCCTTTGATAAAGGAAATGAAGTTATGTGAAGTTTTGGATCCTAGGTTGGTGATTCCTTCTGACATGAAAGCTCTGCTTAGATTAGCCAAAGTGGCTTCAGCTTGTGTTGGTAACTCAAGGAAGTGCAGGCCTTCCATGGCTCAAGTTGCAAACATTTTAAGCAATTTGGAGATGGAAGTGTGCCTTTGA 1005 0.4249 MKHGYIAYDLVMVALSISLIVLGVILFLVCKKKPVDESEETLPIKSSAQAYSLMDIDAATDGFNHRRIIGKGRLGTVYAGLHEKGELVAVKRIHPVLVLSNAGFGFSSVLKWLSSAQHPNIVPIIGFSEAPGERIIVRELVRMASLEFYLHQNFNGASLLDWNKRIKIGAGAARGLHYLHEVATPNIVHGCVKSSNVLIDANFCPRVSGFGLNFLAPMEKRGLVGYVDGEYWNGRGGGGASKESDVYGLGVVLLELLSGRGCDEGLLVKWALPLIKEMKLCEVLDPRLVIPSDMKALLRLAKVASACVGNSRKCRPSMAQVANILSNLEMEVCL* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3782 334 Pfam Protein tyrosine and serine/threonine kinase 66 324 IPR001245 GO:0004672|GO:0006468
Lja4g3782 334 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 4 333 - -
Lja4g3782 334 SUPERFAMILY Protein kinase-like (PK-like) 41 325 IPR011009 -
Lja4g3782 334 Gene3D Transferase(Phosphotransferase) domain 1 142 332 - -
Lja4g3782 334 ProSiteProfiles Protein kinase domain profile. 63 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g3782 334 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 4 333 - -
Lja4g3782 334 PIRSF ILK 33 333 - -
Lja4g3782 334 Gene3D Phosphorylase Kinase; domain 1 27 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3782 Lja-Chr4 70115717 70117162 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3782 40 325 Receptor kinase-like Gene Family AT3G59420 38.000 3.07e-53 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Lja4g3782 PK_Tyr_Ser-Thr 4e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3782 - - gmx:100809726 521.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3782 4 70115717 70117162 Lja4g3782 4 70115717 70117162 ECH