Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3773 ATGGCGGGCTTGATCGATCTCAACACGGCTGAGGACGATGAAACGCCGTCATCTGGTGGCTCTTCTTCCACCTCTGCCACCAGCATGAGTATTACTACTGCAACCCCTTCTGCTTCTTCTGTGTGCTTGGAGCTCTGGCATGCGTGTGCGGGTCCTATGATCTGTCTTCCGAAGAAAGGAAGCGTTGTTGTGTACTTTCCTCAAGGACACTTGGAGCTGGTTCAGGATCTTCAGCTTCTTCTCCCGAACATTCCACCCCATGTGTTCTGTCGTGTTGTTGATGTCAAGCTTCATGCAGAGGAAGGGAGTGATGAAGTGTATTGCCAGGTTTTGTTGGTTCCTGAAAGTGAGCAAGTGCAGCAGAAGTTGCAGGAAGGGGAAGTTGATGCTGATGGTGAAGAGGAGGAGGATACTGAAACTATGATGAAGTCATCAACACCCCACATGTTCTGCAAGACTCTCACTGCATCTGATACTAGTACTCATGGTGGATTCTCTGTGCCTCGTCGAGCAGCGGAAGATTGCTTTCCTCCCCTGGATTACAGTCAACAGAGACCTTCACAAGAGCTTGTGGCAAAGGATCTGCATGGCCGGGAATGGAAGTTCCGTCATATTTACCGGGGGCAGCCACGGAGACATTTGTTAACAACCGGATGGAGTGGATTTGTGAACAAGAAGAAGCTTGTGTCTGGAGATGCTGTTCTGTTTCTTAGGGGTGAAGATGGAGAACTGAGATTGGGAATTCGTAGGGCAGCTCAATTGAATAATGGGTGTACCTTTTCTGCTCTCCCGGGCCAGCAATTGAATCATAGCAGTCTTACTGATGTGTTTAATGCTTTATCTACAAGAAGTGCCTTCAGCGTTCACTACAATCCAAGGGCCAGCTCATCTGAGTTCATCGTACCTATCCACAAGTTCTTAAAGAGCCTTGATTATTCTTATTCAGCTGGAATGAGGTTCAGAATGCGTTTTGAAACCGACGATGCTGCAGAGAGAAGATGTGCAGGATTAATTGTTGGAATTACTGATGTGGATCCTGTTAGATGGCCTGGATCAAAATGGAAATGCCTACTGGTAAGGTGGGATGACTTAGAAGCCACAAGAAATAATAGGGTTTCCCCATGGGAGATTGAGCCATCTGGTTCTGCTTCCATCCCCAATAACTTGATGGCAGCTAGTTTGAAGAGGACCAGGATTGGATTGCCTTCAACACAGCTAGAATTTCCAGTTCCCAATGGGATGGGAGCATCAGACTTTGGGGAATCACTAAGGTTCCAGAAGGTCTTGCAAGGTCAAGAAATTTCGGGCGTTGATACTACTTTTGATGGTATTAATGCGCCGAGTCACCAATCGTATGAATTAAGGAGATGTTATCCTGGTTCAAACTACCCTGGGATTTCATCAACAGGAAGCAGCATCAGAATCCCTCAAATGAGTTCTGATGTTTCCTACAACAGCATAGGCTTTAGTGAATCTTTCCGATTCCAGAAGGTCTTGCAAGGTCAAGAAATACTTCCTAGCCAACCATATGGAGGAGCCTCTGGTTATGAGGCTTGTGGAAATGGTGGCTTTGGAGTTTTTGATGGTTACCAGGTGCTGAGATCCAGAAATGGATGGTCAACCCATATGAACAACCATCCTTCACATTTGCATCAATCTGTTCCAGCCGGGCAAGTTTCATCTCCTTCATCTGTGTTAACGTTTCAGCAATCAATCAATCAAGGTGTGAACTTGGAGACCAATAACAAAACCAATCAGGTGATGGAGGGTAGAGTCCACCACCAAGGCTTATATCCTTCAACAATGAAAGGTGGAACGTTTGTATCAACCCCCTCTTGTGAGCCTAGTTTCCGCCGGCAAGCTCAGGAAGATGCTAATTCTTTGGGTTTTATAAATTTGCATAATCAGTTGGATAGTTCACACTCACATGATCCTATTTCACTACTGAGAGGCCCTCAAGAGGTGGTTTCCTCATGTAAAAGTAGCTGCAGAGTCTTTGGTTTTTCATTAACTGAGGGTGCTCGCAGTGCAAATGAGGAGGCTGACCCATCTACAGTCACTTGTCAATTAAATCCTGGAACTTCTTTTATCAGACACGTCGAAGATGATTTCCGTCCAAGGCATTCGCTTCGGAGCAAGGCAGTTGGAAAATATTGTAGCAAAGAAGTGCTGCAGTATTGA 2181 0.4585 MAGLIDLNTAEDDETPSSGGSSSTSATSMSITTATPSASSVCLELWHACAGPMICLPKKGSVVVYFPQGHLELVQDLQLLLPNIPPHVFCRVVDVKLHAEEGSDEVYCQVLLVPESEQVQQKLQEGEVDADGEEEEDTETMMKSSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGREWKFRHIYRGQPRRHLLTTGWSGFVNKKKLVSGDAVLFLRGEDGELRLGIRRAAQLNNGCTFSALPGQQLNHSSLTDVFNALSTRSAFSVHYNPRASSSEFIVPIHKFLKSLDYSYSAGMRFRMRFETDDAAERRCAGLIVGITDVDPVRWPGSKWKCLLVRWDDLEATRNNRVSPWEIEPSGSASIPNNLMAASLKRTRIGLPSTQLEFPVPNGMGASDFGESLRFQKVLQGQEISGVDTTFDGINAPSHQSYELRRCYPGSNYPGISSTGSSIRIPQMSSDVSYNSIGFSESFRFQKVLQGQEILPSQPYGGASGYEACGNGGFGVFDGYQVLRSRNGWSTHMNNHPSHLHQSVPAGQVSSPSSVLTFQQSINQGVNLETNNKTNQVMEGRVHHQGLYPSTMKGGTFVSTPSCEPSFRRQAQEDANSLGFINLHNQLDSSHSHDPISLLRGPQEVVSSCKSSCRVFGFSLTEGARSANEEADPSTVTCQLNPGTSFIRHVEDDFRPRHSLRSKAVGKYCSKEVLQY* 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3773 726 Gene3D - 313 386 - -
Lja4g3773 726 MobiDBLite consensus disorder prediction 1 30 - -
Lja4g3773 726 SUPERFAMILY DNA-binding pseudobarrel domain 142 257 IPR015300 -
Lja4g3773 726 Gene3D - 148 252 IPR015300 -
Lja4g3773 726 ProSiteProfiles B3 DNA-binding domain profile. 150 252 IPR003340 GO:0003677
Lja4g3773 726 MobiDBLite consensus disorder prediction 124 145 - -
Lja4g3773 726 Pfam Auxin response factor 277 357 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lja4g3773 726 PANTHER AUXIN RESPONSE FACTOR 32 726 - -
Lja4g3773 726 SMART B3_2 150 252 IPR003340 GO:0003677
Lja4g3773 726 Pfam B3 DNA binding domain 150 251 IPR003340 GO:0003677
Lja4g3773 726 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 32 726 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lja4g3773 726 MobiDBLite consensus disorder prediction 11 30 - -
Lja4g3773 726 Coils Coil 116 136 - -
Lja4g3773 726 CDD B3_DNA 148 250 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3773 Lja-Chr4 69968065 69974447 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3773 37 516 B3 DNA Binding Superfamily AT5G60450 51.205 1.31e-151 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lja4g3773 B3 2e-23 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3773 K14486 - gmx:100808119 1041.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3773 4 69968065 69974447 Lja4g3773 4 69968065 69974447 ECH