Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3771 ATGGATTTCAGCTCCAGCAATGGCAGTGAAGACACTGAACTTTCCCAAGCTCAGATTCACCTCTACAAACACGTCTACAACTTCGTCAGCTCCATGGCTCTCAAATCCGCCATGGAACTAGGCATCGCCGACGTGATCCACAGCCATGGAAAACCCATCACCCTCCCTGAGTTAGCCACTGCCTTGAACCTCCGCCCTTCCAAAATCGGCGTCCTCCACCGCTTCCTCCGCCTGCTAACCCACAACGGTTTCTTCGCCAAAACCACCGTGTCCCGAGGTGAAGGAGCAGAGGAAGAAACAGCGTACGGTCTCACACCGCCATCGAAGCTTCTGGTGAAAAGCAACTCAACGTGTTTAGCTCCAATTGTGAAGGGAGCACTTCATCCAAGCTCGTTGGACATGTGGCGATCGTCGAAGAAATGGTTCTTGGAGGACAATGAAGAACTGACTCTGTTTGAGAGCGCAACAGGGGAGAGCTTCTGGGAGTTTCTGAACAAGGAAACGGAGTCTGATACGCTGAGCATGTTTCAGGAGGCTATGGCGGCGGATTCTCACATGTTTAAGCTTGCTTTGAAGGAGTGTAAGCATGTGTTTGAGGGTTTGGGTTCTCTTGTTGATGTTGCAGGGGGAAGAGGGGGTGTTACCAAACTGATTCGTGAAGCGTTCCCTCATGTGAAGTGTACGGTTTTTGATCAGCCTCAGGTTGTGGCTAACTTGACTGGAGATGAGAATTTGAACTTTGTTGGTGGTGATATGTTCAAGTCTGTCCCTCCTGCAGATGCTGTTCTGTTGAAGTGGGTTCTGCATGACTGGAATGATGAGCTCTCCTTAAAGATATTGAAGAACTGCAAAGAAGCTATTTCAGGGAGAGGGAAAGAAGGCAAAGTGATTATCATAGACATATCAATTGATGAAACAAGTGATGACAGAGAACTGACTGAGTTGAAATTGGACTATGACTTGGTCATGCTGACTATGTTCAATGGAAAAGAAAGAGAGAAGAAAGAATGGGAGAAGCTCATATATGATGCAGGCTTCAGCAGCTACAAGATTACACCCATATGTGGCTTCAAGTCTCTCATTGAAGTTTTTCCTTAA 1098 0.4727 MDFSSSNGSEDTELSQAQIHLYKHVYNFVSSMALKSAMELGIADVIHSHGKPITLPELATALNLRPSKIGVLHRFLRLLTHNGFFAKTTVSRGEGAEEETAYGLTPPSKLLVKSNSTCLAPIVKGALHPSSLDMWRSSKKWFLEDNEELTLFESATGESFWEFLNKETESDTLSMFQEAMAADSHMFKLALKECKHVFEGLGSLVDVAGGRGGVTKLIREAFPHVKCTVFDQPQVVANLTGDENLNFVGGDMFKSVPPADAVLLKWVLHDWNDELSLKILKNCKEAISGRGKEGKVIIIDISIDETSDDRELTELKLDYDLVMLTMFNGKEREKKEWEKLIYDAGFSSYKITPICGFKSLIEVFP* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3771 365 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 365 IPR016461 GO:0008168
Lja4g3771 365 PIRSF O-mtase 1 365 IPR016461 GO:0008168
Lja4g3771 365 Pfam Dimerisation domain 32 80 IPR012967 GO:0046983
Lja4g3771 365 Pfam O-methyltransferase domain 135 347 IPR001077 GO:0008171
Lja4g3771 365 Gene3D Vaccinia Virus protein VP39 112 365 IPR029063 -
Lja4g3771 365 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 116 363 IPR029063 -
Lja4g3771 365 PANTHER ISOFLAVONE 4'-O-METHYLTRANSFERASE 7 365 - -
Lja4g3771 365 Gene3D - 3 111 IPR036388 -
Lja4g3771 365 SUPERFAMILY "Winged helix" DNA-binding domain 12 115 IPR036390 -
Lja4g3771 365 PANTHER O-METHYLTRANSFERASE 7 365 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3771 Lja-Chr4 69916889 69919341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3771 29 352 Monolignol Biosynthesis Gene Families AT5G54160 34.242 1.12e-46 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3771 K22588 - gmx:100807589 595.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3771 4 69916889 69919341 Lja4g3771 4 69916889 69919341 ECH