Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3770 ATGTTGGTGGAAATTGCATTAGCTTTATTGGCACTAGCCTTGTTCTTACAATTTCGTCCTACACCAACTGCAAAATCCAAAGCCCTTCGCCACCTTCCAAACCCTCCAAGTCCCAAGCCTCGTCTTCCATTCGTAGGACACCTTCACCTTTTGGACCAACCTCTCCTCCACAACTCCCTCATCAAACTTGGTGAGAAATATGGGCCTTTATACACTCTCTATTTTGGTTCTATGCCCACCGTCGTTGCCTCCACCCCTGAACTTTTCAAACTCTTCCTCCAGACACACGAGGCTACTTCCTTCAGCACAAGGTTCCAAACCTCCGCCATCCGCCGCCTCACCTACGACAACTCAGTCGCCATGGTACCTTTTGCTCCTTACTGGAAGTTCATCAGGAAGGTCATCATGAACGACCTCCTCAACGCCACCACAGTCAACAAGTTGAGGCCTCTGAGGAGCCAAGAAATTCGTAAGGTTCTGAAGGCGATGGCTCAAAGTGCAGAATCTCAAAAACCCCTTAATGTCACCGAGGAGCTTCTCAAGTGGACAAACAGCACCATCTCTCGGATGATGTTGGGGGAGGCTGAACATGTCAAAGATATTGTTCGTGAGGTGCTTAAGATCTTCGGGGAATATAGTCTCACTGACTTCATTTGGCCTTTGAAGAAGCTCAGGGTTGGACAATATGAGAAGAGAATAGATGAGATATTCAACAAGTTCGACCCTGTCATTGAGAAGGTCATCAAGAAACGCCAAGAGATAATAAAGAGGAGAAAAGAGAGAAACGGAGAACTTGAGGAGGGTGAGCAAAGTGTAGTTTTCCTTGATACTTTGCTTGAATATGCTGCGGACGAGAACATGGAGATCAAAATCACTAAGGAACAAATCAAGGGCCTTGTAGTGGATTTCTTTTCAGCAGGGACAGATTCAACAGCCGTGGCAACAGACTGGGCTTTGGCAGAGCTAATCAACAACCCGAGGGTGCTGAAGAAAGCAAGAGAGGAAGTTGACAGTGTTGTGGGAAAGGATAGGCTTGTTGACGAATCAGATATTCAGAATCTTCCATACATCAGAGCCATTGTGAAGGAGACATTCCGCATGCACCCTCCACTCCCTGTTGTCAAGAGAAAGTGTGTACAAGAGTGTGAGCTCAACGGATACGTGATCCCAGAGGGAGCACTAGTACTCTTCAATGTGTGGGCCGTGCAAAGAGACCCAAAATACTGGAAGACTCCATTGGAATTCCGTCCAGAGAGGTTTTTGGAAGAAGCAGACATTGATCTCAAGGGTCAGCATTTCGAGCTTCTCCCATTTGGGTCTGGAAGGAGGATGTGTCCTGGAGTGAATTTGGCCACAGCAGGAATGGCTACACTGCTTTCATCTGTTATCCAATGCTTTGAACTGCAAGTTGTGGGTCCGAAAGGCCAAATATTGAAGGGAAGTGATGCCAAAGCTAACATGGAGGAAAGAGCTGGTCTCACTGTTCCAAGGGCAAATAGTCTCATGTGTGTTCCTCTTGCAAGATCCAAGGCGTACCTGAAGCAGAATATATGGCCAACTTAA 1563 0.4696 MLVEIALALLALALFLQFRPTPTAKSKALRHLPNPPSPKPRLPFVGHLHLLDQPLLHNSLIKLGEKYGPLYTLYFGSMPTVVASTPELFKLFLQTHEATSFSTRFQTSAIRRLTYDNSVAMVPFAPYWKFIRKVIMNDLLNATTVNKLRPLRSQEIRKVLKAMAQSAESQKPLNVTEELLKWTNSTISRMMLGEAEHVKDIVREVLKIFGEYSLTDFIWPLKKLRVGQYEKRIDEIFNKFDPVIEKVIKKRQEIIKRRKERNGELEEGEQSVVFLDTLLEYAADENMEIKITKEQIKGLVVDFFSAGTDSTAVATDWALAELINNPRVLKKAREEVDSVVGKDRLVDESDIQNLPYIRAIVKETFRMHPPLPVVKRKCVQECELNGYVIPEGALVLFNVWAVQRDPKYWKTPLEFRPERFLEEADIDLKGQHFELLPFGSGRRMCPGVNLATAGMATLLSSVIQCFELQVVGPKGQILKGSDAKANMEERAGLTVPRANSLMCVPLARSKAYLKQNIWPT* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3770 520 SUPERFAMILY Cytochrome P450 30 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3770 520 Pfam Cytochrome P450 36 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3770 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Lja4g3770 520 PANTHER 2-HYDROXYISOFLAVANONE SYNTHASE 2 509 - -
Lja4g3770 520 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3770 520 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3770 520 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3770 520 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3770 520 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3770 520 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3770 520 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3770 520 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3770 520 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3770 520 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3770 520 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3770 520 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 2 509 - -
Lja4g3770 520 Gene3D Cytochrome P450 24 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3770 Lja-Chr4 69894290 69899579 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3770 5 508 Cytochrome P450 AT5G06900 36.047 7.42e-111 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3770 K23179 K24188 ag:BAA76380 861.677