Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3764 ATGGATTTCAGTACCAGCAATGAAGAGAGTGAACTGTCCCAAGCTCAAACCGAACTCTACAAACACGTGTACAATTTCGTGGGTTCCATGGCTCTCAAATCTGCTATGGAATTAGGCATAGCAGACGCGATCCACAGCCATGGAAAACCCATTACCCTCCTTGAATTGGCCACCGTGTTGAACCTCCACCCTTCCAAAATCGGTGTCCTCCACCGACTCTTGCGGCTGTTAACTCACAACGGTTTGTTTGCCAGAACAACAGTGCCAGGAATTGAAGGTGCAGAGGAAGAAACAGCGTATGGTTTGACACCACCATCGAAGCTTCTGGTGAAAAGCAACTCAACGTGTTTAGCTCCAATTGTGAAGGGAGCGCTTCATTCAAGCTCGTTGGACATGTGGGGCTCCTCGAAAAAATGGTTGACAGAGGACAAGGAAGATCTCACCCTGTTTGAGAGCGCGACAGGGGAGAGCTTCTGGGAGTTTTTGAACAAGGAAACGGAATCTGATACGCTGAGCATGTTTCAGGAGGCTATGGCGGCGGATTCAAACATGTTCAAGCTTGCTTTGAAAGAGTGCATGCATGTGTTTGAGGGTTTGACTTCTCTTGTTGATGTGGCAGGGGGAAGAGGGGGTATCTCAAAACTCATCCATGAAGCATTCCCTGACATTAAGTGCACGGTGTTTGATCAGCCCCAGGTTGTGGCTAGCTTGTCTGGAGATGAAAACTTGAACTTTGTTGCTGGAGATATGTTCATGTCCATCCCTCCTGCAGATGCAGTTTTGTTGAAGTGGGTTCTCCATGACTGGAATGATGAACAATCCTTAAAGATATTGAAGAATTGCAAAGAAGCTATTTCAGGGAGAGGGAAAGATGGAAAGGTGATTATCATAGAAATATTAATTGATGAAACAAGTGATGACAGAGAACTGACTGAATTGAAACTTAAATATGACTTGGTGTTGCTTAGTATGTTCAATGGAAAAGAAAGAGAGAAGAAAGAATGGGAGGAGCTCATATATGGTGCAGGCTTCAGCAGCTACAAGATTACCCCCATATGTGGCATCAAGTCTCTCATTGAAGTTTTTCCATAA 1092 0.4496 MDFSTSNEESELSQAQTELYKHVYNFVGSMALKSAMELGIADAIHSHGKPITLLELATVLNLHPSKIGVLHRLLRLLTHNGLFARTTVPGIEGAEEETAYGLTPPSKLLVKSNSTCLAPIVKGALHSSSLDMWGSSKKWLTEDKEDLTLFESATGESFWEFLNKETESDTLSMFQEAMAADSNMFKLALKECMHVFEGLTSLVDVAGGRGGISKLIHEAFPDIKCTVFDQPQVVASLSGDENLNFVAGDMFMSIPPADAVLLKWVLHDWNDEQSLKILKNCKEAISGRGKDGKVIIIEILIDETSDDRELTELKLKYDLVLLSMFNGKEREKKEWEELIYGAGFSSYKITPICGIKSLIEVFP* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3764 363 Gene3D Vaccinia Virus protein VP39 110 363 IPR029063 -
Lja4g3764 363 SUPERFAMILY "Winged helix" DNA-binding domain 9 113 IPR036390 -
Lja4g3764 363 Gene3D - 3 109 IPR036388 -
Lja4g3764 363 Pfam O-methyltransferase domain 133 345 IPR001077 GO:0008171
Lja4g3764 363 PANTHER O-METHYLTRANSFERASE 5 363 IPR016461 GO:0008168
Lja4g3764 363 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 363 IPR016461 GO:0008168
Lja4g3764 363 PANTHER ISOFLAVONE 4'-O-METHYLTRANSFERASE 5 363 - -
Lja4g3764 363 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Lja4g3764 363 PIRSF O-mtase 1 363 IPR016461 GO:0008168
Lja4g3764 363 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 361 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3764 Lja-Chr4 69797182 69801124 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3764 30 350 Monolignol Biosynthesis Gene Families AT5G54160 33.333 2.46e-47 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3764 K22588 - gmx:100807589 559.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3764 4 69797182 69801124 Lja4g3764 4 69797182 69801124 ECH