Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3763 ATGAGTTCCATGGCTCTCAAATCTGCTATGGAATTAGGCATAGCAGACGCAATCCACAGCCATGGAAAACCCATAACATTCCTTGAATTGGGCTCCGCGTTGAATCTCCACCCTTCAAAAATCGGCTTCCTACACCGACTATTGCGGCTGTTAACTCACAACGGTTTGTTTGCCAAAACAACAGTGTCAGGAATTGAAGGTGTAGATGAAACAGCGTATGGTTTGACACCACCATCGAAGCTTCTTGTGAAAAGCAATTCATTGTGTTTAGCCCCATTTGTGAAGGGAGCGCTTCTTCCAAGCTCGTTGGAAATGTGGGGCTCCTCGAAGAAATGGTTGACAGAGGACAAGGAAGATCTCCCCTTGTTTGAGAGCGCCACCGGGGAGAGCTATTGGGAGTTTCTCAATAAGGAATCTGAGTCTGAAACGCTGAACATGTTTCAGGAGGCCATGGTTGCTGATTCACACATGTTCAAGTTTGCTCTGAAAGAGTGCAAGCATGTGTTCGAGGGTTTGACTTCTCTTGTTGATGTGGCAGGGGGAAGAGGGGGTATCTCAAAACTCATCCATGAAGCATTCCCTGACATTAAGTGCACGGTGTTTGATCAGCCCCAGGTTGTGGCTAGCTTGTCTGGAGATGAAAACTTGAACTTTGTTGCTGGAGATATGTTCATGTCCATCCCTCCAGCAGATGCTGTTTTGTTGAAGTGGGTTCTCCATGACTGGAATGATGAACACTCCTTAAAGATATTGAAGAATTGCAAAGAAGCTATTTCAGGGAGAGGGAAAGATGGGAAGGTGATTATCATAGAAATATTAATTGATGAAACAAGTGATGACAGAGAACTGACTGAGTTGAAACTAAAATATGACTTGGTGTTGCTTAGTATGTCGAATGGAAAAGAAAGAGAGAAGAAAGAATGGGAGGAGCTCATATATGGTGCAGGCTTCAGCAGCTACAAGATTACCCCCATATGTGGCATCAAGTCTCTCATTGAAGTTTTTCCATAA 1011 0.4421 MSSMALKSAMELGIADAIHSHGKPITFLELGSALNLHPSKIGFLHRLLRLLTHNGLFAKTTVSGIEGVDETAYGLTPPSKLLVKSNSLCLAPFVKGALLPSSLEMWGSSKKWLTEDKEDLPLFESATGESYWEFLNKESESETLNMFQEAMVADSHMFKFALKECKHVFEGLTSLVDVAGGRGGISKLIHEAFPDIKCTVFDQPQVVASLSGDENLNFVAGDMFMSIPPADAVLLKWVLHDWNDEHSLKILKNCKEAISGRGKDGKVIIIEILIDETSDDRELTELKLKYDLVLLSMSNGKEREKKEWEELIYGAGFSSYKITPICGIKSLIEVFP* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3763 336 Pfam O-methyltransferase domain 106 318 IPR001077 GO:0008171
Lja4g3763 336 PIRSF O-mtase 1 336 IPR016461 GO:0008168
Lja4g3763 336 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 336 IPR016461 GO:0008168
Lja4g3763 336 Pfam Dimerisation domain 4 52 IPR012967 GO:0046983
Lja4g3763 336 PANTHER ISOFLAVONE 4'-O-METHYLTRANSFERASE 1 336 - -
Lja4g3763 336 Gene3D - 1 82 IPR036388 -
Lja4g3763 336 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 88 334 IPR029063 -
Lja4g3763 336 Gene3D Vaccinia Virus protein VP39 84 336 IPR029063 -
Lja4g3763 336 PANTHER O-METHYLTRANSFERASE 1 336 IPR016461 GO:0008168
Lja4g3763 336 SUPERFAMILY "Winged helix" DNA-binding domain 2 86 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3763 Lja-Chr4 69726740 69733293 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3763 4 323 Monolignol Biosynthesis Gene Families AT5G54160 35.455 1.63e-48 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3763 K22588 K13259 gmx:100807589 509.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3763 4 69726740 69733293 Lja4g3763 4 69726740 69733293 ECH