Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3762 ATGGACATATTCATGTCCCTTGTTTCATTCACCATCTCATTGCATGACAACTTGATCACAGTGTTGCATCTGAAGCTACATTTGGCAAAATTATCTGCACCACAACTTCTGACTATGGGCGCAGTTCTGATTGCTCTGCCTAGTTTGTGGCTCAGAGATTTGTCTTCCATATCTTTCCTCTCAACTCTTGGTGTTCTCATGACTCTTGTCATTTTTATGTCTGTAGCAGCCACTGCAATTGTTGGAGATGTCAGAGTTAATCATGAAATACCCTTCTTCCAGCTCCACAACATTCCATCAATTTCAGGGATTTACGTCTTCAGTTATGGAGGACACATTGTTTTCCCCAATTTGTACAAGGCCATGAAAGACCCCTCAAAGTTTACCAAGGTTTCTATTGTGAGCTTCACAATAGTTACAGCACTCTATACAATAATGGGGTTCATGGGTGCAAAAATGTTTGGACCTAGTGTCAAATCTCAAGTAACTCTCAGCATGCCCCCAAATCAAATTGTGACAAAAATTGCATTGTGGGCAACCGTGCTGACACCTATGACCAAATATGCTCTTGCATTTTCACCATTCGCTATTCAGCTGGAGCATATGCTTCCTAATTCCATGAGTGGCAGGACCAAAATGATAATTAGGGGCCTCATTGGTTCCTCTTTTCTTTTGGTTATACTAGCTCTTGCTCTCACAGTACCTTATTTTGAGCATGCTCTCAGCCTCACTGGTTCCCTTGTTAGTGTTGCTATCTCGCTTATTTTCCCATGTGCTTTCTACATGAAGATTTTCTGGGGTCACATATCAAAGCCTCTCTTGGTCCTCAACATGTCTATCATCACTTTTGGGTTTCTTCTTGGAGTGGTTGGTACCATTTCCTCCTCAAAATCACTAGTGAAATTTTTTCTAGCTCGTTAG 921 0.4148 MDIFMSLVSFTISLHDNLITVLHLKLHLAKLSAPQLLTMGAVLIALPSLWLRDLSSISFLSTLGVLMTLVIFMSVAATAIVGDVRVNHEIPFFQLHNIPSISGIYVFSYGGHIVFPNLYKAMKDPSKFTKVSIVSFTIVTALYTIMGFMGAKMFGPSVKSQVTLSMPPNQIVTKIALWATVLTPMTKYALAFSPFAIQLEHMLPNSMSGRTKMIIRGLIGSSFLLVILALALTVPYFEHALSLTGSLVSVAISLIFPCAFYMKIFWGHISKPLLVLNMSIITFGFLLGVVGTISSSKSLVKFFLAR* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3762 306 PANTHER AMINO ACID TRANSPORTER AVT1H 1 302 - -
Lja4g3762 306 PANTHER OS05G0424000 PROTEIN-RELATED 1 302 - -
Lja4g3762 306 Pfam Transmembrane amino acid transporter protein 3 293 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3762 Lja-Chr4 69692490 69694056 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3762 1 301 Amino Acid or Auxin Permease AAAP Family AT5G16740 61.238 9.47e-116 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3762 - - lja:Lj4g3v0485960.1 580.867