Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3756 ATGAAGAAGGTTTCCAAGACAAGCTGCAAGTCTGCATCACACAAGCTCTTTAAGGACAAGGCGAAGAATCGTGTTGATGACCTGCAGCTGGTGTTTCTTGATCTGCAGTTTGCTAGGAAGGAGAGCCGTACGGTTGATGCTGCAGTTCTTGAGGAACAAGTCCATCAGATGCTTCGTGAGTGGAAGAATGAGCTCAATGAGCCTTCGCCTGCTTCTTCTTTGCAGCAAGATGGCAGTCTTGGGTCATTCTCCACCGATATCTGTCGGCTTTTGCAGCTCTGTGAGGAGGAAGATGATGCCTCTAGTCCATTAGCTGCACCTAAGCCTGAGCCTGTTGATCAGACTCTTCCAGCTGGGAGCAAGGTCATATTCCAAGGGGGCCAACAGCAACATGATTTTCCATTGGTTAATGAATGCAAGCACTCAACCTCAAGAGCTCAAAATATGGCAGCTAACAAGCCAGATGGACCTGCTTTAGAATATCATCAGTTTGATTTGCATCAGGACTTTGATCACAGCTTTTATACTGGATTTAATGGCTCAGGTTATTGTGAGGAGGATGCTATTCCTCATATATCTAGCTATCTACCCAGTATCTGCCCTCCACCTTCTGCTTTCTTAGGCCCAAAATGTGCACTTTGGGACTGTCCAAGACCTGCACAAGGGTTGGACTGGTGTCAAGATTATTGCAGTAGCTATCATGCTGCTCTAGCTTTGAATGAAGGTCCACCAGGTATGGCCCCAGTTCTACGACCTGGGGGCATTGGTTTGAAGGATAATCTACTTTTTTCTGCTCTTAGTGCAAAGGCACAAGGAAAAGATGTCGGCATCCCAGAATGTGAGGGAGCAGCAACTGCAAAGTCTCCATGGAATGCCCCTGAACTCTTTGATCTTTCTGTTCTTGAGGGTGAGACTATCAGGGAGTGGCTCTTCTTCGATAAGCCTCGGCGAGCATTTGAGAGTGGAAACAGAAAGCAGAGGTCATTGCCAGATTACAGTGGACGCGGTTGGCATGAATCTAGAAAGCAAGTGATCAATGAATTTGGAGGGCTGAAGAGATCCTACTATATGGATCCACAACCACTGAACCATTTCGAGTGGCACCTTTATGAATATGAGATTAGCAAGTGTGATTTATGTGCCTTGTACCGATTGGAACTGAAGCTCGTTGAGGGAAAGAAGAACTCCAAGGCAAAATTAACAAACGATTCAGTTGCTGATCTGCAGAAGCAGATGGGAAAGCTCTCCGCCGAGTTTCCGCCAGATAACAAAAGGCCTGCTAAAGGCAGAGCCAAAATCAATGCCAGAGTTGCCATGGGTGGTGTCTATTCACACAGAGTGACTCCACTGAACGGAACATATGAGTATGGGTTAGCTTCCCCATATGACTACCTTGTTGACAACTTGGGTGACTACTATGGGACATGA 1428 0.4657 MKKVSKTSCKSASHKLFKDKAKNRVDDLQLVFLDLQFARKESRTVDAAVLEEQVHQMLREWKNELNEPSPASSLQQDGSLGSFSTDICRLLQLCEEEDDASSPLAAPKPEPVDQTLPAGSKVIFQGGQQQHDFPLVNECKHSTSRAQNMAANKPDGPALEYHQFDLHQDFDHSFYTGFNGSGYCEEDAIPHISSYLPSICPPPSAFLGPKCALWDCPRPAQGLDWCQDYCSSYHAALALNEGPPGMAPVLRPGGIGLKDNLLFSALSAKAQGKDVGIPECEGAATAKSPWNAPELFDLSVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVINEFGGLKRSYYMDPQPLNHFEWHLYEYEISKCDLCALYRLELKLVEGKKNSKAKLTNDSVADLQKQMGKLSAEFPPDNKRPAKGRAKINARVAMGGVYSHRVTPLNGTYEYGLASPYDYLVDNLGDYYGT* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3756 475 PANTHER TRANSCRIPTION FACTOR VOZ1 1 475 - -
Lja4g3756 475 PANTHER TRANSCRIPTION FACTOR VOZ1 1 475 IPR039277 GO:0006355|GO:0048578
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3756 Lja-Chr4 69599299 69603975 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3756 3 473 VOZ-9 Transcription Factor Family AT1G28520 70.961 0.0 688
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Lja4g3756 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3756 - - gmx:100798565 907.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3756 4 69599299 69603975 Lja4g3756 4 69599299 69603975 ECH