Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3750 ATGAGGGGAAACACACGCCATCGCAGTTCATGCGCTGCTTGCAAGCAACTCAAGAGAAGATGCGATGCACCCTGCATTCTTGCTCCACATTTCCCACTGACCAAGACTCGAGAATTCGAAGCGGTTCGCAAGGTTTTCGGCACCAACAACATCATCAAGATGCTCTCCGATCTCGACCCACAAGGAAGAATCGAAGCTGTGAAATCGCTCGAATGGGAAGCGTTGATGTGGCAGAACGACCCTGTTCATGGACCTCTCGGTGCTTTCATGCAACTCCAACGGAAACAGCAGCAAGAATCGGGTCTCAATCTTGAGCTCAAATTGATGTCCCAGTTGCAAGATTCAGCAGTGGATCGACCTAGCCAAGAGGGGGTAAAGAGGATAGTGCAATTGAAGGCAATGTTGATCAAAGCAGTGGAAGGACCCAAAGCTAAATTTCAGCATGTTAGACCATATGTGAATAGTAGAGTGAAGCAGGTAGCAGATGAAGGATTTTCCACAGGAGAAAAATGTGTATATACCTTGACAAGACACTTACTTAGAAACCATACTTCTGGAGTTTTGTAA 567 0.4656 MRGNTRHRSSCAACKQLKRRCDAPCILAPHFPLTKTREFEAVRKVFGTNNIIKMLSDLDPQGRIEAVKSLEWEALMWQNDPVHGPLGAFMQLQRKQQQESGLNLELKLMSQLQDSAVDRPSQEGVKRIVQLKAMLIKAVEGPKAKFQHVRPYVNSRVKQVADEGFSTGEKCVYTLTRHLLRNHTSGVL* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3750 188 ProSiteProfiles LOB domain profile. 9 109 IPR004883 -
Lja4g3750 188 PANTHER LOB DOMAIN-CONTAINING PROTEIN 2 5 111 - -
Lja4g3750 188 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 5 111 - -
Lja4g3750 188 Pfam Lateral organ boundaries (LOB) domain 10 99 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3750 Lja-Chr4 69546134 69547942 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3750 1 95 AS2 family AT3G11090 47.917 2.90e-23 89.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lja4g3750 LOB 2.2e-29 No_clan