Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3746 ATGTCTGTCCTTTGTTTTGCTTCAACTTCTTTTTCAGTTCTACTCATTTCTTTGTCTGTTTTCTTCAGAACTTCATCATGCTTAGCCATTCTTTCAGTTGATTACTATGCAAAATCTTGCCCCCAGTTAGAGCAGCTTGTTGGCTCAGTCACCTCTCAGCAATTCAAAGAATCACCTGTTTCTGGACCTGCCACCATTCGTCTTCTCTTCCATGATTGCTTTGTAGAAGGATGTGATGCTTCAATTTTAATAGCATCAAAGCCTGGAAGCAAGGAATTGGCTGAGAAAGATGCAGAGGATAACAAAGATTTGAGGGTGGAAGGCTTTGAGACTGTGAGGAAGGCCAAGGAAATAGTGGAGAAAAAGTGCCCTGGCATTGTGTCTTGTGCAGACATTCTTGCAATTGCAGCCAGAGATTATGTTCACCTGGCAGGAGGACCCTATTACCAAGTGAAAAAAGGAAGATGGGATGGAAAGATCTCAAAGGCATCACGAGTGGCCCCCAACATCCCACGTGCAAACTTCACCGTTGATCAACTCATCAAGCTCTTCAACTCCAAAGGCCTAGCCACACAAGACATGGTCACTCTCTCCGGCGCCCACACAATCGGGTTCGCCCACTGCAACCACTTCGTGACCCGACTCTACAATTTCAAGGGCACGGATCAACCCGACCCGGACATGGATCCGAAGTTGGTTCACGCTCTGCGACTGTATTGTCCGAACTCCGGTGGAAACTCCGACATCGTTGCCCCATTCGATGCTACTACACCTTTCGTGTTTGATCATGCGTATTACAGTAACTTGCAGAAGAAGATGGGTTTGTTGGGTTCAGATCAAGGTTTGGCTTTGGATCCACGAACGAAGGCGATGGTTGTGGATCTTGCGAAGGATAAGCAGCGGTTTTTTCAGGCTTTTGTGGCGGCTATGGATAAATTGAGTTCGATTAAAGTGGTGAGAGGGAGGAAACACGGGGAGAAAAGAAGAGATTGTAGCGTGCAGGGGTGA 1008 0.4692 MSVLCFASTSFSVLLISLSVFFRTSSCLAILSVDYYAKSCPQLEQLVGSVTSQQFKESPVSGPATIRLLFHDCFVEGCDASILIASKPGSKELAEKDAEDNKDLRVEGFETVRKAKEIVEKKCPGIVSCADILAIAARDYVHLAGGPYYQVKKGRWDGKISKASRVAPNIPRANFTVDQLIKLFNSKGLATQDMVTLSGAHTIGFAHCNHFVTRLYNFKGTDQPDPDMDPKLVHALRLYCPNSGGNSDIVAPFDATTPFVFDHAYYSNLQKKMGLLGSDQGLALDPRTKAMVVDLAKDKQRFFQAFVAAMDKLSSIKVVRGRKHGEKRRDCSVQG* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3746 335 PANTHER PEROXIDASE 25-RELATED 24 331 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g3746 335 ProSitePatterns Peroxidases active site signature. 62 73 IPR019794 GO:0004601
Lja4g3746 335 PANTHER PEROXIDASE 19 24 331 - -
Lja4g3746 335 CDD secretory_peroxidase 31 333 IPR033905 GO:0004601|GO:0042744
Lja4g3746 335 SUPERFAMILY Heme-dependent peroxidases 31 333 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lja4g3746 335 Gene3D - 34 333 - -
Lja4g3746 335 PRINTS Haem peroxidase superfamily signature 193 208 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g3746 335 PRINTS Haem peroxidase superfamily signature 254 269 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g3746 335 PRINTS Haem peroxidase superfamily signature 145 157 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g3746 335 PRINTS Haem peroxidase superfamily signature 127 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g3746 335 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g3746 335 Gene3D Peroxidase, domain 2 171 313 - -
Lja4g3746 335 ProSiteProfiles Plant heme peroxidase family profile. 30 335 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g3746 335 ProSitePatterns Peroxidases proximal heme-ligand signature. 193 203 IPR019793 -
Lja4g3746 335 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g3746 335 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g3746 335 PRINTS Plant peroxidase signature 192 204 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g3746 335 PRINTS Plant peroxidase signature 308 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g3746 335 PRINTS Plant peroxidase signature 145 160 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g3746 335 PRINTS Plant peroxidase signature 126 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g3746 335 PRINTS Plant peroxidase signature 268 285 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g3746 335 PRINTS Plant peroxidase signature 107 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g3746 335 PRINTS Plant peroxidase signature 252 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g3746 335 Pfam Peroxidase 50 297 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3746 Lja-Chr4 69507834 69511388 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3746 31 333 Peroxidase AT2G34060 66.337 2.96e-156 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3746 K00430 - gmx:100777463 538.11